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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA722925" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA722925 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
710237 710237 PRJNA722925_S_NODE_1261_length_375_cov_1.642012_g1198_i0 PRJNA722925 1261 375 1.642012 6.157545 Pseudoloma neurophilia 146866 Fungi Fungi 549 1.0399999999999999e-151   NTclustered gi|11993647|gb|AF322654.1| 146866 g1198 i0 99.338 77.9893333333333 302 2 81 0 1 302 303 2 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 29246 549 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
19837235 19837235 PRJNA722925_S_NODE_8956_length_163_cov_1.166667_g8893_i0 PRJNA722925 8956 163 1.166667 1.90166721 Pseudoloma neurophilia 146866 Fungi Fungi 302 1.22e-77   NTclustered gi|11993647|gb|AF322654.1| 146866 g8893 i0 100 99.9263803680982 163 0 100 0 1 163 1230 1068 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 16288 302 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
22387701 22387701 PRJNA722925_S_NODE_3838_length_226_cov_3.497354_g3775_i0 PRJNA722925 3838 226 3.497354 7.90402004 Pseudoloma neurophilia 146866 Fungi Fungi 414 2.23e-111   NTclustered gi|11993647|gb|AF322654.1| 146866 g3775 i0 99.558 98.712389380531 226 1 100 0 1 226 847 622 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 22309 414 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
24936789 24936789 PRJNA722925_S_NODE_3700_length_230_cov_2.709845_g3637_i0 PRJNA722925 3700 230 2.709845 6.2326435 Pseudoloma neurophilia 146866 Fungi Fungi 425 1.05e-114   NTclustered gi|11993647|gb|AF322654.1| 146866 g3637 i0 100 94.4913043478261 230 0 100 0 1 230 516 287 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 21733 425 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
24936823 24936823 PRJNA722925_S_NODE_9720_length_158_cov_2.900826_g9657_i0 PRJNA722925 9720 158 2.900826 4.58330508 Pseudoloma neurophilia 146866 Fungi Fungi 289 9.14e-74   NTclustered gi|11993647|gb|AF322654.1| 146866 g9657 i0 99.367 73.6139240506329 158 1 100 0 1 158 1752 1909 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11631 289 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;