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contig_metadata

29 rows where analysis = "blastn", bioproject = "PRJNA722925" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 29 ✖

tax_clade 1

bioproject 1

  • PRJNA722925 · 29 ✖

analysis 1

  • blastn · 29 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
710243 710243 PRJNA722925_S_NODE_2581_length_272_cov_1.574468_g2518_i0 PRJNA722925 2581 272 1.574468 4.28255296 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 503 5.729999999999998e-138   NTclustered gi|1202135013|gb|KY476314.1| 151077 g2518 i0 100 100.408088235294 272 0 100 0 1 272 66 337 Chilodonella uncinata 18S ribosomal RNA gene, partial sequence blastn 27311 503 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
710244 710244 PRJNA722925_S_NODE_2781_length_262_cov_61.373333_g2718_i0 PRJNA722925 2781 262 61.373333 160.79813246 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 451 2.02e-122   NTclustered gi|10782|emb|X54004.1| 5908 g2718 i0 97.71 60.0190839694656 262 6 100 0 1 262 1930 2191 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 15725 451 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
3261568 3261568 PRJNA722925_S_NODE_4023_length_222_cov_2.713514_g3960_i0 PRJNA722925 4023 222 2.713514 6.02400108 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 294 2.96e-75   NTclustered gi|10789|emb|X61053.1| 5908 g3960 i0 90.541 96.9054054054054 222 21 100 0 1 222 933 712 T.pyriformis TU20 gene for ubiquitin blastn 21513 294 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
4538640 4538640 PRJNA722925_S_NODE_2224_length_291_cov_2.688976_g2161_i0 PRJNA722925 2224 291 2.688976 7.82492016 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 315 3.11e-81   NTclustered gi|110645063|gb|DQ665311.1| 151077 g2161 i0 96.335 8.45704467353952 191 7 66 0 101 291 1205 1015 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 2461 315 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
4538658 4538658 PRJNA722925_S_NODE_5164_length_200_cov_1.435583_g5101_i0 PRJNA722925 5164 200 1.435583 2.871166 Tetrahymena paravorax 5905 SAR_Eukaryotes SAR_Eukaryotes 132 2.17e-26   NTclustered gi|114329857|ref|NC_008338.1| 5905 g5101 i0 78.607 4.795 201 41 100 2 1 200 11352 11153 Tetrahymena paravorax mitochondrion, complete genome blastn 959 132 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena paravorax
5021961 5021961 PRJNA722925_S_NODE_4964_length_203_cov_6.584337_g4901_i0 PRJNA722925 4964 203 6.584337 13.36620411 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 370 4.3e-98   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g4901 i0 99.507 101.423645320197 203 1 100 0 1 203 952 1154 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 20589 370 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
6297734 6297734 PRJNA722925_S_NODE_1245_length_376_cov_71.351032_g1182_i0 PRJNA722925 1245 376 71.351032 268.27988032 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 643 4.639999999999999e-180   NTclustered gi|10782|emb|X54004.1| 5908 g1182 i0 99.435 79.2367021276596 354 2 94 0 23 376 1586 1939 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 29793 643 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
6297757 6297757 PRJNA722925_S_NODE_6565_length_182_cov_1.317241_g6502_i0 PRJNA722925 6565 182 1.317241 2.39737862 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 337 3.82e-88   NTclustered gi|1241841584|gb|KY399448.1| 2081900 g6502 i0 100 100.346153846154 182 0 100 0 1 182 382 201 Tetrahymena glochidiophila clone 21485-1 small subunit ribosomal RNA gene, partial sequence blastn 18263 337 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena glochidiophila
6297763 6297763 PRJNA722925_S_NODE_7265_length_175_cov_1.695652_g7202_i0 PRJNA722925 7265 175 1.695652 2.967391 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 289 1.0299999999999998e-73   NTclustered gi|114329902|ref|NC_008339.1| 5907 g7202 i0 97.619 75.08 168 4 96 0 8 175 1121 954 Tetrahymena pigmentosa mitochondrion, complete genome blastn 13139 289 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pigmentosa
8363570 8363570 PRJNA722925_S_NODE_487_length_584_cov_2.135283_g432_i0 PRJNA722925 487 584 2.135283 12.47005272 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 985 0   NTclustered gi|110645063|gb|DQ665311.1| 151077 g432 i0 97.089 29.1558219178082 584 17 100 0 1 584 259 842 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 17027 985 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
8363576 8363576 PRJNA722925_S_NODE_5847_length_190_cov_1.529412_g5784_i0 PRJNA722925 5847 190 1.529412 2.9058828 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 329 6.730000000000001e-86   NTclustered gi|301014695|gb|GQ377692.1| 151077 g5784 i0 97.895 1.33684210526316 190 4 100 0 1 190 211 22 Chilodonella uncinata ribosomal protein S23a-like (rps23a) mRNA, complete sequence blastn 254 329 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
8846669 8846669 PRJNA722925_S_NODE_4607_length_209_cov_37.005814_g4544_i0 PRJNA722925 4607 209 37.005814 77.34215126 root 1 Root_unresolved Root_unresolved 381 2.0599999999999996e-101   NTclustered gi|10832|emb|X54512.1| 5911 g4544 i0 99.522 89.066985645933 209 1 100 0 1 209 8322 8114 T. thermophila rdn A+ gene for pre-RNA, 17S rRNA, 5.8S rRNA, 26S rRNA blastn 18615 381 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
11397315 11397315 PRJNA722925_S_NODE_8089_length_169_cov_1.181818_g8026_i0 PRJNA722925 8089 169 1.181818 1.99727242 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 278 2.14e-70   NTclustered gi|114329902|ref|NC_008339.1| 5907 g8026 i0 96.471 20.094674556213 170 3 100 3 1 169 2311 2478 Tetrahymena pigmentosa mitochondrion, complete genome blastn 3396 278 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pigmentosa
12189588 12189588 PRJNA722925_S_NODE_5930_length_189_cov_1.282895_g5867_i0 PRJNA722925 5930 189 1.282895 2.42467155 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 187 4.26e-43   NTclustered gi|146185505|ref|XM_001031981.2| 312017 g5867 i0 84.865 3.75661375661376 185 28 98 0 1 185 761 577 Tetrahymena thermophila SB210 60S ribosomal protein L2/L8 partial mRNA blastn 710 187 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
14739348 14739348 PRJNA722925_S_NODE_9412_length_160_cov_1.585366_g9349_i0 PRJNA722925 9412 160 1.585366 2.5365856 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 268 1.21e-67   NTclustered gi|110645063|gb|DQ665311.1| 151077 g9349 i0 96.875 26.3 160 5 100 0 1 160 983 824 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 4208 268 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
18562111 18562111 PRJNA722925_S_NODE_7255_length_175_cov_1.978261_g7192_i0 PRJNA722925 7255 175 1.978261 3.46195675 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 73.1 1.13e-8   NTclustered gi|829188944|ref|XM_001031587.2| 312017 g7192 i0 83.333 0.445714285714286 78 13 45 0 9 86 153 76 Tetrahymena thermophila SB210 60S ribosomal L7Ae-like protein partial mRNA blastn 78 73.1 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
19045476 19045476 PRJNA722925_S_NODE_2295_length_287_cov_6.444000_g2232_i0 PRJNA722925 2295 287 6.444 18.49428 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 279 1.12e-70   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g2232 i0 97.546 60.0278745644599 163 4 57 0 125 287 3082 2920 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 17228 279 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
19045496 19045496 PRJNA722925_S_NODE_915_length_438_cov_31.860349_g852_i0 PRJNA722925 915 438 31.860349 139.54832862 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 765 0   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g852 i0 98.174 83.6232876712329 438 8 100 0 1 438 1493 1930 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 36627 765 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
19837189 19837189 PRJNA722925_S_NODE_10616_length_154_cov_1.435897_g10553_i0 PRJNA722925 10616 154 1.435897 2.21128138 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 263 5.36e-66   NTclustered gi|347439273|gb|JN111985.1| 151077 g10553 i0 97.403 42.4675324675325 154 4 100 0 1 154 30 183 Chilodonella uncinata strain USA_SC2 clone SP2 beta tubulin (btub) gene, partial cds; macronuclear blastn 6540 263 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
19837227 19837227 PRJNA722925_S_NODE_816_length_457_cov_23.380952_g754_i0 PRJNA722925 816 457 23.380952 106.85095064 Chilodonella hexasticha 1938391 SAR_Eukaryotes SAR_Eukaryotes 734 0   NTclustered gi|1389430805|gb|MH341633.1| 1938391 g754 i0 95.624 74.1838074398249 457 20 100 0 1 457 2373 1917 Chilodonella hexasticha strain C.hexasticha AS large subunit ribosomal RNA gene, partial sequence blastn 33902 734 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella hexasticha
19837239 19837239 PRJNA722925_S_NODE_9776_length_158_cov_1.611570_g9713_i0 PRJNA722925 9776 158 1.61157 2.5462806 Tetrahymena pigmentosa 5907 SAR_Eukaryotes SAR_Eukaryotes 267 4.2799999999999996e-67   NTclustered gi|114329902|ref|NC_008339.1| 5907 g9713 i0 97.436 14.5379746835443 156 4 99 0 3 158 2153 2308 Tetrahymena pigmentosa mitochondrion, complete genome blastn 2297 267 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pigmentosa
21595874 21595874 PRJNA722925_S_NODE_5437_length_195_cov_17.696203_g5374_i0 PRJNA722925 5437 195 17.696203 34.50759585 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 350 5.34e-92   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g5374 i0 98.974 100.271794871795 195 2 100 0 1 195 1268 1462 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 19553 350 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
22871194 22871194 PRJNA722925_S_NODE_1918_length_310_cov_19.073260_g1855_i0 PRJNA722925 1918 310 19.07326 59.127106 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 568 2.3299999999999995e-157   NTclustered gi|1837628855|gb|MN158348.1| 5909 g1855 i0 99.677 98.6709677419355 310 1 100 0 1 310 2962 2653 Tetrahymena rostrata strain TRAUS 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 30588 568 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena rostrata
22871195 22871195 PRJNA722925_S_NODE_198_length_848_cov_16.747226_g168_i0 PRJNA722925 198 848 16.747226 142.01647648 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 1402 0   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g168 i0 96.679 51.2818396226415 843 28 99 0 6 848 1 843 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 43487 1402 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
22871205 22871205 PRJNA722925_S_NODE_4518_length_211_cov_9.051724_g4455_i0 PRJNA722925 4518 211 9.051724 19.09913764 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 368 1.6200000000000002e-97   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g4455 i0 98.104 76.0995260663507 211 4 100 0 1 211 2573 2363 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 16057 368 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
23663294 23663294 PRJNA722925_S_NODE_3319_length_242_cov_1.224390_g3256_i0 PRJNA722925 3319 242 1.22439 2.9630238 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 420 5.19e-113   NTclustered gi|110644972|gb|DQ665918.1| 151077 g3256 i0 97.934 98.0495867768595 242 5 100 0 1 242 321 562 Chilodonella uncinata clone 1 beta-tubulin gene, partial cds blastn 23728 420 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
23663307 23663307 PRJNA722925_S_NODE_5939_length_189_cov_1.065789_g5876_i0 PRJNA722925 5939 189 1.065789 2.01434121 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 327 2.41e-85   NTclustered gi|110645063|gb|DQ665311.1| 151077 g5876 i0 97.884 1 189 4 100 0 1 189 214 26 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 189 327 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
24145212 24145212 PRJNA722925_S_NODE_199_length_848_cov_11.680641_g168_i1 PRJNA722925 199 848 11.680641 99.05183568 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 1363 0   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g168 i1 95.853 51.2110849056604 844 33 99 2 1 843 843 1 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 43427 1363 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
25420238 25420238 PRJNA722925_S_NODE_1080_length_401_cov_51.637363_g1017_i0 PRJNA722925 1080 401 51.637363 207.06582563 root 1 Root_unresolved Root_unresolved 719 0   NTclustered gi|345541658|gb|JN547815.1| 5911 g1017 i0 99.002 72.5835411471322 401 4 100 0 1 401 3808 3408 Tetrahymena thermophila strain ATCC 30382 18S ribosomal RNA gene, partial sequence; and internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 26S ribosomal RNA gene, complete sequence blastn 29106 719 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;