RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA722925" and tax_kingdom = "Thermotogati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJNA722925 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13464016 13464016 PRJNA722925_S_NODE_2151_length_295_cov_1.875969_g2088_i0 PRJNA722925 2151 295 1.875969 5.53410855 Deinococcus taeanensis 2737050 Bacteria Bacteria 496 1.05e-135   NTclustered gi|2105694697|gb|CP083456.1| 2737050 g2088 i0 96.949 212.162711864407 295 9 100 0 1 295 1621 1915 Deinococcus taeanensis strain TS293 plasmid p_TS293_2, complete sequence blastn 62588 496 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus taeanensis
16496634 16496634 PRJNA722925_S_NODE_5933_length_189_cov_1.250000_g5870_i0 PRJNA722925 5933 189 1.25 2.3625 Deinococcus 1298 Bacteria Bacteria 311 2.42e-80   NTclustered gi|730601855|gb|CP010028.1| 57497 g5870 i0 96.296 193.433862433862 189 7 100 0 1 189 69630 69818 Deinococcus swuensis strain DY59, complete genome blastn 36559 311 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus radiopugnans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;