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contig_metadata

19 rows where analysis = "blastn", bioproject = "PRJNA721440" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 19 ✖

bioproject 1

  • PRJNA721440 · 19 ✖

analysis 1

  • blastn · 19 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1986174 1986174 PRJNA721440_S_NODE_2202_length_373_cov_3.283951_g2076_i0 PRJNA721440 2202 373 3.283951 12.24913723 Aparavirus sp. 1955142 Viruses Viruses 311 5.3e-80   NTclustered gi|2196304182|gb|MZ679100.1| 1955142 g2076 i0 82.192 3.27345844504021 365 61 97 4 2 364 4518 4880 MAG: Aparavirus sp. isolate s48-k141_542821 hypothetical protein 1 and hypothetical protein 2 genes, complete cds blastn 1221 311 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae Aparavirus Aparavirus sp.
5813720 5813720 PRJNA721440_S_NODE_2905_length_331_cov_284.294326_g2779_i0 PRJNA721440 2905 331 284.294326 941.01421906 Cytomegalovirus macacinebeta3 3050308 Viruses Viruses 121 8.419999999999999e-23   NTclustered gi|1953437643|gb|MT157331.1| 47929 g2779 i0 96.053 0.734138972809668 76 0 22 2 2 74 162963 162888 Macacine betaherpesvirus 3 strain UCD59, complete genome blastn 243 121 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Cytomegalovirus Cytomegalovirus macacinebeta3
8363477 8363477 PRJNA721440_S_NODE_5307_length_259_cov_196.723810_g5181_i0 PRJNA721440 5307 259 196.72381 509.5146679 Betacoronavirus pandemicum 3418604 Viruses Viruses 122 1.7699999999999998e-23   NTclustered gi|2165833299|emb|OV195597.1| 2697049 g5181 i0 95 0.602316602316602 80 1 30 3 183 259 120 41 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 156 122 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
9638635 9638635 PRJNA721440_S_NODE_5748_length_251_cov_72.539604_g5622_i0 PRJNA721440 5748 251 72.539604 182.07440604 Betacoronavirus pandemicum 3418604 Viruses Viruses 119 2.21e-22   NTclustered gi|2165835426|emb|OV196492.1| 2697049 g5622 i0 94.872 14.9482071713147 78 1 30 2 1 75 61 138 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 3752 119 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
10914202 10914202 PRJNA721440_S_NODE_929_length_537_cov_31.508197_g807_i0 PRJNA721440 929 537 31.508197 169.19901789 Caudoviricetes sp. 2832643 Viruses Viruses 65.8 6.78e-6   NTclustered gi|2056808531|tpg|BK057475.1| 2832643 g807 i0 97.436 0.480446927374302 39 0 7 1 42 79 17 55 MAG TPA_asm: Caudoviricetes sp. isolate ctwEd7, partial genome blastn 258 65.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
12189465 12189465 PRJNA721440_S_NODE_3090_length_323_cov_59.204380_g2964_i0 PRJNA721440 3090 323 59.20438 191.2301474 Betacoronavirus pandemicum 3418604 Viruses Viruses 122 2.2799999999999994e-23   NTclustered gi|2165835005|emb|OV196273.1| 2697049 g2964 i0 96.104 0.439628482972136 77 0 23 2 250 323 112 36 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 142 122 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
13463892 13463892 PRJNA721440_S_NODE_14331_length_179_cov_2.961538_g14205_i0 PRJNA721440 14331 179 2.961538 5.30115302 Ampelovirus tetravitis 3426346 Viruses Viruses 60.2 9.06e-5   NTclustered gi|2452977696|gb|OP752675.1| 70177 g14205 i0 100 0.17877094972067 32 0 18 0 1 32 13853 13822 Grapevine leafroll-associated virus 4 isolate LC9_N5, complete genome blastn 32 60.2 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae Ampelovirus Ampelovirus tetravitis
13463915 13463915 PRJNA721440_S_NODE_2551_length_351_cov_1.033113_g2425_i0 PRJNA721440 2551 351 1.033113 3.62622663 Betacoronavirus pandemicum 3418604 Viruses Viruses 69.4 3.29e-7   NTclustered gi|2557639802|emb|OY695838.1| 2697049 g2425 i0 95.455 0.216524216524217 44 1 12 1 304 346 4713 4756 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 76 69.4 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
16012698 16012698 PRJNA721440_S_NODE_9193_length_211_cov_0.481481_g9067_i0 PRJNA721440 9193 211 0.481481 1.01592491 Tasmanian devil retrovirus 1332312 Viruses Viruses 385 1.61e-102   NTclustered gi|618757818|gb|KC845928.1| 1332312 g9067 i0 99.526 98.8767772511848 211 1 100 0 1 211 970 1180 Tasmanian devil retrovirus strain DRV2010 polymerase (pol) and envelope protein (env) genes, partial cds blastn 20863 385 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Alpharetrovirus Tasmanian devil retrovirus
18561987 18561987 PRJNA721440_S_NODE_3395_length_309_cov_16.330769_g3269_i0 PRJNA721440 3395 309 16.330769 50.46207621 Lymphocryptovirus humangamma4 3050299 Viruses Viruses 52.8 0.029   NTclustered gi|2609791700|gb|OR652422.1| 10376 g3269 i0 100 0.0906148867313916 28 0 9 0 282 309 9242 9269 Human gammaherpesvirus 4 strain 725, partial genome blastn 28 52.8 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
18561997 18561997 PRJNA721440_S_NODE_5695_length_252_cov_208.211823_g5569_i0 PRJNA721440 5695 252 208.211823 524.69379396 Betacoronavirus pandemicum 3418604 Viruses Viruses 82.4 2.9099999999999998e-11   NTclustered gi|2046845739|emb|OU076650.1| 2697049 g5569 i0 96.078 0.468253968253968 51 0 19 1 204 252 204 154 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 118 82.4 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
18562010 18562010 PRJNA721440_S_NODE_9595_length_208_cov_0.930818_g9469_i0 PRJNA721440 9595 208 0.930818 1.93610144 Achromobacter phage tuull 3074846 Viruses Viruses 58.4 3.92e-4   NTclustered gi|2618964722|gb|OR396896.1| 3074846 g9469 i0 94.737 0.182692307692308 38 0 18 2 6 42 36626 36662 Achromobacter phage tuull, partial genome blastn 38 58.4 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Achromobacter phage tuull
19837061 19837061 PRJNA721440_S_NODE_10956_length_198_cov_3.765101_g10830_i0 PRJNA721440 10956 198 3.765101 7.45489998 Lymphocryptovirus humangamma4 3050299 Viruses Viruses 56.5 0.001   NTclustered gi|1465382783|emb|LS992247.1| 10376 g10830 i0 97.059 0.343434343434343 34 0 17 1 1 33 58024 58057 Human gammaherpesvirus 4 isolate Human herpesvirus 4 genome assembly, chromosome: I blastn 68 56.5 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
19837074 19837074 PRJNA721440_S_NODE_14176_length_180_cov_1.793893_g14050_i0 PRJNA721440 14176 180 1.793893 3.2290074 Zebrafish picornavirus 1 2304617 Viruses Viruses 305 1.06e-78   NTclustered gi|1990739381|tpg|BK011179.1| 2304617 g14050 i0 97.222 3 180 5 100 0 1 180 5633 5454 TPA_asm: Zebrafish picornavirus 1 strain NCSZCF/ZfPV/2015/North Carolina/USA, complete genome blastn 540 305 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
19837105 19837105 PRJNA721440_S_NODE_3716_length_298_cov_256.232932_g3590_i0 PRJNA721440 3716 298 256.232932 763.57413736 Betacoronavirus pandemicum 3418604 Viruses Viruses 121 7.489999999999999e-23   NTclustered gi|2165835426|emb|OV196492.1| 2697049 g3590 i0 94.937 0.76510067114094 79 1 26 2 1 76 176 254 Severe acute respiratory syndrome coronavirus 2 genome assembly, chromosome: 1 blastn 228 121 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
21112760 21112760 PRJNA721440_S_NODE_3037_length_326_cov_10.826715_g2911_i0 PRJNA721440 3037 326 10.826715 35.2950909 Orthopoxvirus monkeypox 3431483 Viruses Viruses 54.7 0.009   NTclustered gi|2309594316|gb|OP536747.1| 10244 g2911 i0 100 8.89570552147239 29 0 9 0 71 99 119302 119274 Monkeypox virus isolate 9000365, partial genome blastn 2900 54.7 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Chitovirales Poxviridae Orthopoxvirus Orthopoxvirus monkeypox
23663180 23663180 PRJNA721440_S_NODE_14459_length_179_cov_1.130769_g14333_i0 PRJNA721440 14459 179 1.130769 2.02407651 Caudoviricetes sp. 2832643 Viruses Viruses 315 1.75e-81   NTclustered gi|2054434277|tpg|BK035998.1| 2832643 g14333 i0 98.324 328.77094972067 179 3 100 0 1 179 17963 18141 MAG TPA_asm: Caudoviricetes sp. isolate ctbaE6, partial genome blastn 58850 315 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
23663210 23663210 PRJNA721440_S_NODE_3879_length_293_cov_16.106557_g3753_i0 PRJNA721440 3879 293 16.106557 47.19221201 Caudoviricetes sp. 2832643 Viruses Viruses 63.9 1.26e-5   NTclustered gi|2059855482|tpg|BK040575.1| 2832643 g3753 i0 97.368 0.238907849829352 38 0 13 1 1 37 5 42 MAG TPA_asm: Caudoviricetes sp. isolate ctwIV1, partial genome blastn 70 63.9 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
25420209 25420209 PRJNA721440_S_NODE_4380_length_280_cov_22.835498_g4254_i0 PRJNA721440 4380 280 22.835498 63.9393944 root 1 Root_unresolved Root_unresolved 65.8 3.31e-6   NTclustered gi|2609791700|gb|OR652422.1| 10376 g4254 i0 100 1.51428571428571 35 0 13 0 10 44 9277 9243 Human gammaherpesvirus 4 strain 725, partial genome blastn 424 65.8 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;