RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA721440" and tax_superkingdom = "Archaea"

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tax_kingdom 2

tax_superkingdom 1

  • Archaea · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA721440 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17288169 17288169 PRJNA721440_S_NODE_10494_length_201_cov_3.559211_g10368_i0 PRJNA721440 10494 201 3.559211 7.15401411 Vulcanisaeta moutnovskia 985052 Archaea Archaea 52.8 0.017   NTclustered gi|323706731|gb|CP002529.1| 985053 g10368 i0 100 0.139303482587065 28 0 14 0 41 68 336127 336100 Vulcanisaeta moutnovskia 768-28, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Vulcanisaeta Vulcanisaeta moutnovskia
19837096 19837096 PRJNA721440_S_NODE_21656_length_153_cov_12.288462_g21530_i0 PRJNA721440 21656 153 12.288462000000001 18.80134686 uncultured Methanolobus sp. 218300 Archaea Archaea 56.5 0.001   NTclustered gi|2621717818|emb|OY776215.1| 218300 g21530 i0 94.595 0.241830065359477 37 0 24 2 15 50 2739072 2739037 MAG: uncultured Methanolobus sp. isolate 56865bd2-6141-42f0-955c-5236203a12ea genome assembly, chromosome: 1 blastn 37 56.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanosarcinales Methanosarcinaceae Methanolobus uncultured Methanolobus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;