contig_metadata
14 rows where analysis = "blastn", bioproject = "PRJNA721440" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1193623 | 1193623 | PRJNA721440_S_NODE_10121_length_204_cov_1.058065_g9995_i0 | PRJNA721440 | 10121 | 204 | 1.058065 | 2.1584526 | Streptococcus | 1301 | Bacteria | Bacteria | 372 | 1.2e-98 | NTclustered | gi|2579561176|gb|CP134469.1| | 1307 | g9995 | i0 | 99.51 | 391.019607843137 | 204 | 1 | 100 | 0 | 1 | 204 | 21521 | 21724 | Streptococcus suis strain M104170_C2 chromosome, complete genome | blastn | 79768 | 372 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus suis | ||
| 1193627 | 1193627 | PRJNA721440_S_NODE_16081_length_172_cov_1.536585_g15955_i0 | PRJNA721440 | 16081 | 172 | 1.536585 | 2.6429262 | Catenibacterium | 135858 | Bacteria | Bacteria | 56.5 | 0.001 | NTclustered | gi|2299336055|gb|CP102271.1| | 100886 | g15955 | i0 | 100 | 0.348837209302326 | 30 | 0 | 17 | 0 | 113 | 142 | 577955 | 577926 | Catenibacterium mitsuokai strain DSM 15897 chromosome, complete genome | blastn | 60 | 56.5 | 1 | Bacteria | Bacillati | Bacillota | Erysipelotrichia | Erysipelotrichales | Coprobacillaceae | Catenibacterium | Catenibacterium mitsuokai | ||
| 1193628 | 1193628 | PRJNA721440_S_NODE_17721_length_167_cov_1.245763_g17595_i0 | PRJNA721440 | 17721 | 167 | 1.245763 | 2.08042421 | Bacillati | 1783272 | Bacteria | Bacteria | 298 | 1.63e-76 | NTclustered | gi|1176884116|gb|CP020463.1| | 1282 | g17595 | i0 | 98.802 | 496.850299401198 | 167 | 2 | 100 | 0 | 1 | 167 | 2278287 | 2278121 | Staphylococcus epidermidis strain 1457 chromosome, complete genome | blastn | 82974 | 298 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 4538520 | 4538520 | PRJNA721440_S_NODE_10004_length_205_cov_0.871795_g9878_i0 | PRJNA721440 | 10004 | 205 | 0.871795 | 1.78717975 | Lactobacillus sp. IBH004 | 2879107 | Bacteria | Bacteria | 329 | 7.39e-86 | NTclustered | gi|2426115884|gb|CP110217.2| | 2879107 | g9878 | i0 | 95.61 | 338.375609756098 | 205 | 9 | 100 | 0 | 1 | 205 | 1321156 | 1321360 | Lactobacillus sp. IBH004 chromosome, complete genome | blastn | 69367 | 329 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lactobacillus | Lactobacillus sp. IBH004 | ||
| 6297672 | 6297672 | PRJNA721440_S_NODE_19325_length_163_cov_1.728070_g19199_i0 | PRJNA721440 | 19325 | 163 | 1.72807 | 2.8167541 | Pediococcus | 1253 | Bacteria | Bacteria | 298 | 1.58e-76 | NTclustered | gi|1035434175|gb|CP015918.1| | 1255 | g19199 | i0 | 100 | 450.398773006135 | 161 | 0 | 99 | 0 | 3 | 163 | 128686 | 128846 | Pediococcus pentosaceus strain wikim20, complete genome | blastn | 73415 | 298 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Pediococcus | Pediococcus pentosaceus | ||
| 6297677 | 6297677 | PRJNA721440_S_NODE_7385_length_229_cov_1.355556_g7259_i0 | PRJNA721440 | 7385 | 229 | 1.355556 | 3.10422324 | root | 1 | Root_unresolved | Root_unresolved | 424 | 3.76e-114 | NTclustered | gi|2556673542|gb|OR367734.1| | 1282 | g7259 | i0 | 100 | 174.991266375546 | 229 | 0 | 100 | 0 | 1 | 229 | 1410 | 1182 | Staphylococcus epidermidis strain A3 16S ribosomal RNA gene, partial sequence | blastn | 40073 | 424 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 7571461 | 7571461 | PRJNA721440_S_NODE_8466_length_217_cov_3.398810_g8340_i0 | PRJNA721440 | 8466 | 217 | 3.39881 | 7.3754177 | root | 1 | Root_unresolved | Root_unresolved | 379 | 7.739999999999998e-101 | NTclustered | gi|1370563981|gb|CP027781.1| | 1491 | g8340 | i0 | 99.052 | 97.2073732718894 | 211 | 2 | 97 | 0 | 1 | 211 | 3985092 | 3985302 | Clostridium botulinum strain MAP 5 chromosome, complete genome | blastn | 21094 | 379 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium botulinum | ||
| 11397234 | 11397234 | PRJNA721440_S_NODE_4729_length_272_cov_2.376682_g4603_i0 | PRJNA721440 | 4729 | 272 | 2.376682 | 6.46457504 | Erysipelotrichales | 526525 | Bacteria | Bacteria | 62.1 | 4.15e-5 | NTclustered | gi|2777632677|dbj|AP031432.1| | 1982626 | g4603 | i0 | 97.297 | 0.544117647058823 | 37 | 0 | 13 | 1 | 27 | 62 | 1565408 | 1565444 | Faecalibacillus intestinalis i32-0019-2J8 DNA, complete genome | blastn | 148 | 62.1 | 1 | Bacteria | Bacillati | Bacillota | Erysipelotrichia | Erysipelotrichales | Coprobacillaceae | Faecalibacillus | Faecalibacillus intestinalis | ||
| 11397236 | 11397236 | PRJNA721440_S_NODE_6189_length_244_cov_3.769231_g6063_i0 | PRJNA721440 | 6189 | 244 | 3.769231 | 9.19692364 | root | 1 | Root_unresolved | Root_unresolved | 121 | 5.949999999999999e-23 | NTclustered | gi|1878067685|dbj|LC566215.1| | 1352 | g6063 | i0 | 93.976 | 34.4467213114754 | 83 | 0 | 32 | 4 | 161 | 239 | 128 | 47 | Enterococcus faecium EV0426-12 plasmid pIHVA-EV0426-12 DNA, complete sequence | blastn | 8405 | 122 | 0.991803278688525 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Enterococcus | Enterococcus faecium | ||
| 12673244 | 12673244 | PRJNA721440_S_NODE_20930_length_157_cov_2.157407_g20804_i0 | PRJNA721440 | 20930 | 157 | 2.157407 | 3.38712899 | Pediococcus | 1253 | Bacteria | Bacteria | 279 | 5.46e-71 | NTclustered | gi|2811772618|gb|PQ396677.1| | 1255 | g20804 | i0 | 98.726 | 111.866242038217 | 157 | 2 | 100 | 0 | 1 | 157 | 675 | 831 | Pediococcus pentosaceus strain V9313 16S ribosomal RNA gene, partial sequence | blastn | 17563 | 279 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Pediococcus | Pediococcus pentosaceus | ||
| 13947469 | 13947469 | PRJNA721440_S_NODE_17851_length_167_cov_0.796610_g17725_i0 | PRJNA721440 | 17851 | 167 | 0.79661 | 1.3303387 | Staphylococcus | 1279 | Bacteria | Bacteria | 292 | 7.58e-75 | NTclustered | gi|1928723242|gb|CP042341.1| | 29388 | g17725 | i0 | 98.204 | 583.365269461078 | 167 | 3 | 100 | 0 | 1 | 167 | 786217 | 786051 | Staphylococcus capitis strain BN2 chromosome, complete genome | blastn | 97422 | 292 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus capitis | ||
| 15222183 | 15222183 | PRJNA721440_S_NODE_11492_length_195_cov_1.082192_g11366_i0 | PRJNA721440 | 11492 | 195 | 1.082192 | 2.1102744 | Pediococcus | 1253 | Bacteria | Bacteria | 361 | 2.46e-95 | NTclustered | gi|1035434175|gb|CP015918.1| | 1255 | g11366 | i0 | 100 | 472.676923076923 | 195 | 0 | 100 | 0 | 1 | 195 | 127266 | 127072 | Pediococcus pentosaceus strain wikim20, complete genome | blastn | 92172 | 361 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Pediococcus | Pediococcus pentosaceus | ||
| 17288175 | 17288175 | PRJNA721440_S_NODE_12614_length_188_cov_0.956835_g12488_i0 | PRJNA721440 | 12614 | 188 | 0.956835 | 1.7988498 | Staphylococcus epidermidis | 1282 | Bacteria | Bacteria | 315 | 1.8599999999999999e-81 | NTclustered | gi|2180323311|gb|CP090985.1| | 1282 | g12488 | i0 | 96.809 | 520.739361702128 | 188 | 6 | 100 | 0 | 1 | 188 | 1636913 | 1637100 | Staphylococcus epidermidis strain 50D chromosome, complete genome | blastn | 97899 | 315 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 20320061 | 20320061 | PRJNA721440_S_NODE_9856_length_206_cov_1.528662_g9730_i0 | PRJNA721440 | 9856 | 206 | 1.528662 | 3.14904372 | Streptococcus | 1301 | Bacteria | Bacteria | 359 | 9.47e-95 | NTclustered | gi|1782758915|gb|CP018189.1| | 1304 | g9730 | i0 | 98.058 | 563.203883495146 | 206 | 4 | 100 | 0 | 1 | 206 | 17919 | 18124 | Streptococcus salivarius strain ICDC3 chromosome, complete genome | blastn | 116020 | 359 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus salivarius |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;