RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA719595" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA719595 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1985540 1985540 PRJNA719595_P_NODE_8702_length_245_cov_0.906977_g8667_i0 PRJNA719595 8702 245 0.906977 2.22209365 Yarrowia lipolytica 4952 Fungi Fungi 372 1.49e-98   NTclustered gi|2801357908|ref|XM_503717.3| 4952 g8667 i0 100 0.820408163265306 201 0 82 0 45 245 2640 2440 Yarrowia lipolytica uncharacterized protein (YALI1_E11136g), partial mRNA blastn 201 372 1 Eukaryota Opisthokonta Fungi Ascomycota Dipodascomycetes Dipodascales   Yarrowia Yarrowia lipolytica
5813034 5813034 PRJNA719595_P_NODE_6505_length_253_cov_0.866667_g6470_i0 PRJNA719595 6505 253 0.866667 2.19266751 Cercospora kikuchii 84275 Fungi Fungi 424 4.22e-114   NTclustered gi|2124596981|ref|XM_044795495.1| 84275 g6470 i0 96.838 2 253 8 100 0 1 253 794 542 Cercospora kikuchii uncharacterized protein (CKM354_000040800), partial mRNA blastn 506 424 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Mycosphaerellales Mycosphaerellaceae Cercospora Cercospora kikuchii
8362785 8362785 PRJNA719595_P_NODE_7567_length_249_cov_0.886364_g7532_i0 PRJNA719595 7567 249 0.886364 2.20704636 Cladosporium cladosporioides 29917 Fungi Fungi 436 5.32e-118   NTclustered gi|301015197|gb|GQ906475.1| 29917 g7532 i0 98.387 88.3333333333333 248 4 99 0 2 249 248 495 Cladosporium cladosporioides transaldolase mRNA, complete cds blastn 21995 436 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides
10913506 10913506 PRJNA719595_P_NODE_8629_length_245_cov_0.906977_g8594_i0 PRJNA719595 8629 245 0.906977 2.22209365 Purpureocillium takamizusanense 2060973 Fungi Fungi 143 1.28e-29   NTclustered gi|2234652211|ref|XM_047983266.1| 2060973 g8594 i0 82.635 12.6408163265306 167 23 67 5 6 169 1154 1317 Purpureocillium takamizusanense Glutamine synthetase (GLN1), mRNA blastn 3097 143 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Ophiocordycipitaceae Purpureocillium Purpureocillium takamizusanense
11397010 11397010 PRJNA719595_P_NODE_6429_length_253_cov_0.866667_g6394_i0 PRJNA719595 6429 253 0.866667 2.19266751 Cladosporium 5498 Fungi Fungi 414 2.54e-111   NTclustered gi|1905450536|gb|MN657180.1| 1707700 g6394 i0 96.774 92.6679841897233 248 8 98 0 6 253 5430 5183 Cladosporium sp. strain YFCC8620 mitochondrion, complete genome blastn 23445 418 0.990430622009569 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium sp.
21112077 21112077 PRJNA719595_P_NODE_8137_length_247_cov_0.896552_g8102_i0 PRJNA719595 8137 247 0.896552 2.21448344 Candida albicans 5476 Fungi Fungi 52.8 0.022   NTclustered gi|1111954566|ref|XM_717482.2| 237561 g8102 i0 100 0.11336032388664 28 0 11 0 31 58 1192 1219 Candida albicans SC5314 cleavage polyadenylation factor subunit (CAALFM_C202150CA), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Candida Candida albicans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;