RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA716463" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA716463 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1983771 1983771 PRJNA716463_P_NODE_32202_length_302_cov_6.742358_g31785_i0 PRJNA716463 32202 302 6.742358 20.36192116 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 407 5.21e-109   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g31785 i0 92.58 6.09271523178808 283 21 98 0 1 283 5032507 5032789 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 1840 407 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
3259213 3259213 PRJNA716463_P_NODE_4003_length_501_cov_4.114486_g3604_i0 PRJNA716463 4003 501 4.114486 20.61357486 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 715 0   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g3604 i0 92.445 44.1596806387226 503 34 100 4 1 501 5032507 5033007 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 22124 715 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
17286805 17286805 PRJNA716463_P_NODE_94734_length_256_cov_2.185792_g94317_i0 PRJNA716463 94734 256 2.185792 5.59562752 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 187 6.1099999999999985e-43   NTclustered gi|2202949261|emb|OV972893.1| 3107663 g94317 i0 80.309 40.1015625 259 41 99 8 3 256 5031705 5031452 MAG: Candidatus Eremiobacteraeota bacterium isolate E.malaspinii_MAG_MP1648_PBLIHF genome assembly, chromosome: 1 blastn 10266 187 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;