contig_metadata
16 rows where analysis = "blastn", bioproject = "PRJNA716463" and tax_phylum = "Rhodophyta"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 707418 | 707418 | PRJNA716463_P_NODE_122561_length_220_cov_4.714286_g122143_i0 | PRJNA716463 | 122561 | 220 | 4.714286 | 10.3714292 | Pyropia haitanensis | 1262161 | Rhodophyta | other_Eukaryota | 407 | 3.61e-109 | NTclustered | gi|2745680298|gb|PP918987.1| | 1262161 | g122143 | i0 | 100 | 2 | 220 | 0 | 100 | 0 | 1 | 220 | 22575 | 22356 | Pyropia haitanensis isolate T2-4 female sex-linked region | blastn | 440 | 407 | 1 | Eukaryota | Rhodophyta | Bangiophyceae | Bangiales | Bangiaceae | Pyropia | Pyropia haitanensis | |||
| 708201 | 708201 | PRJNA716463_P_NODE_5981_length_443_cov_10.962162_g5572_i0 | PRJNA716463 | 5981 | 443 | 10.962162 | 48.56237766 | Pyropia yezoensis | 2788 | Rhodophyta | other_Eukaryota | 228 | 6.629999999999999e-55 | NTclustered | gi|2026667496|dbj|LC216214.1| | 2788 | g5572 | i0 | 84.255 | 0.530474040632054 | 235 | 35 | 53 | 2 | 35 | 269 | 111 | 343 | Pyropia yezoensis hipnB mRNA for hypothetical protein, complete cds | blastn | 235 | 228 | 1 | Eukaryota | Rhodophyta | Bangiophyceae | Bangiales | Bangiaceae | Pyropia | Pyropia yezoensis | |||
| 3259087 | 3259087 | PRJNA716463_P_NODE_30903_length_309_cov_2.449153_g30486_i0 | PRJNA716463 | 30903 | 309 | 2.449153 | 7.56788277 | Pyropia haitanensis | 1262161 | Rhodophyta | other_Eukaryota | 479 | 1.1199999999999996e-130 | NTclustered | gi|1494245825|gb|MG765436.1| | 1262161 | g30486 | i0 | 93.146 | 11.4757281553398 | 321 | 10 | 100 | 1 | 1 | 309 | 202 | 522 | Pyropia haitanensis mitogen-activated protein kinase 13 mRNA, complete cds | blastn | 3546 | 479 | 1 | Eukaryota | Rhodophyta | Bangiophyceae | Bangiales | Bangiaceae | Pyropia | Pyropia haitanensis | |||
| 3259472 | 3259472 | PRJNA716463_P_NODE_56523_length_286_cov_2.023474_g56106_i0 | PRJNA716463 | 56523 | 286 | 2.023474 | 5.78713564 | Pyropia yezoensis | 2788 | Rhodophyta | other_Eukaryota | 468 | 2.21e-127 | NTclustered | gi|30525877|gb|AY273820.1| | 2788 | g56106 | i0 | 96.154 | 74.5489510489511 | 286 | 11 | 100 | 0 | 1 | 286 | 959 | 1244 | Porphyra yezoensis cytosolic glyceraldehyde 3-phosphate dehydrogenase (GAPC) mRNA, complete cds | blastn | 21321 | 468 | 1 | Eukaryota | Rhodophyta | Bangiophyceae | Bangiales | Bangiaceae | Pyropia | Pyropia yezoensis | |||
| 3260118 | 3260118 | PRJNA716463_P_NODE_96623_length_254_cov_2.674033_g96206_i0 | PRJNA716463 | 96623 | 254 | 2.674033 | 6.79204382 | Pyropia haitanensis | 1262161 | Rhodophyta | other_Eukaryota | 470 | 5.37e-128 | NTclustered | gi|193792559|gb|EU807991.1| | 1262161 | g96206 | i0 | 100 | 3.73622047244094 | 254 | 0 | 100 | 0 | 1 | 254 | 265 | 12 | Porphyra haitanensis cytosolic ascorbate peroxidase (APX) mRNA, complete cds | blastn | 949 | 470 | 1 | Eukaryota | Rhodophyta | Bangiophyceae | Bangiales | Bangiaceae | Pyropia | Pyropia haitanensis | |||
| 7087443 | 7087443 | PRJNA716463_P_NODE_9186_length_382_cov_3.336570_g8772_i0 | PRJNA716463 | 9186 | 382 | 3.33657 | 12.7456974 | Pyropia haitanensis | 1262161 | Rhodophyta | other_Eukaryota | 427 | 5.18e-115 | NTclustered | gi|693266814|gb|KM102541.1| | 1262161 | g8772 | i0 | 99.573 | 1.39267015706806 | 234 | 1 | 100 | 0 | 149 | 382 | 761 | 528 | Pyropia haitanensis heat shock protein 40 (HSP40) mRNA, complete cds | blastn | 532 | 427 | 1 | Eukaryota | Rhodophyta | Bangiophyceae | Bangiales | Bangiaceae | Pyropia | Pyropia haitanensis | |||
| 8361945 | 8361945 | PRJNA716463_P_NODE_8507_length_394_cov_1.249221_g8094_i0 | PRJNA716463 | 8507 | 394 | 1.249221 | 4.92193074 | Pyropia haitanensis | 1262161 | Rhodophyta | other_Eukaryota | 385 | 3.27e-102 | NTclustered | gi|567767244|gb|KF715271.1| | 1262161 | g8094 | i0 | 99.526 | 4.60913705583756 | 211 | 1 | 54 | 0 | 65 | 275 | 1469 | 1679 | Pyropia haitanensis heat shock protein 70-5 (HSP70-5) mRNA, complete cds | blastn | 1816 | 385 | 1 | Eukaryota | Rhodophyta | Bangiophyceae | Bangiales | Bangiaceae | Pyropia | Pyropia haitanensis | |||
| 9637030 | 9637030 | PRJNA716463_P_NODE_80808_length_268_cov_1.558974_g80391_i0 | PRJNA716463 | 80808 | 268 | 1.558974 | 4.17805032 | Pyropia haitanensis | 1262161 | Rhodophyta | other_Eukaryota | 473 | 4.419999999999999e-129 | NTclustered | gi|736075336|gb|KM655307.1| | 1262161 | g80391 | i0 | 99.614 | 0.966417910447761 | 259 | 1 | 97 | 0 | 10 | 268 | 1293 | 1035 | Pyropia haitanensis TR mRNA, complete cds | blastn | 259 | 473 | 1 | Eukaryota | Rhodophyta | Bangiophyceae | Bangiales | Bangiaceae | Pyropia | Pyropia haitanensis | |||
| 10911569 | 10911569 | PRJNA716463_P_NODE_13429_length_328_cov_4.929412_g13013_i0 | PRJNA716463 | 13429 | 328 | 4.929412 | 16.16847136 | Pyropia haitanensis | 1262161 | Rhodophyta | other_Eukaryota | 606 | 5.249999999999998e-169 | NTclustered | gi|402483698|gb|JX188386.1| | 1262161 | g13013 | i0 | 100 | 1 | 328 | 0 | 100 | 0 | 1 | 328 | 2256 | 2583 | Porphyra haitanensis lipoxygenase (lox) mRNA, complete cds | blastn | 328 | 606 | 1 | Eukaryota | Rhodophyta | Bangiophyceae | Bangiales | Bangiaceae | Pyropia | Pyropia haitanensis | |||
| 13460977 | 13460977 | PRJNA716463_P_NODE_114871_length_237_cov_2.481707_g114453_i0 | PRJNA716463 | 114871 | 237 | 2.481707 | 5.88164559 | Pyropia yezoensis | 2788 | Rhodophyta | other_Eukaryota | 318 | 1.8999999999999998e-82 | NTclustered | gi|528746196|gb|KC904979.1| | 2788 | g114453 | i0 | 91.139 | 1 | 237 | 18 | 100 | 2 | 1 | 237 | 461 | 228 | Pyropia yezoensis S-phase kinase-associated protein 1 (SKP1) mRNA, complete cds | blastn | 237 | 318 | 1 | Eukaryota | Rhodophyta | Bangiophyceae | Bangiales | Bangiaceae | Pyropia | Pyropia yezoensis | |||
| 16011186 | 16011186 | PRJNA716463_P_NODE_85013_length_264_cov_3.445026_g84596_i0 | PRJNA716463 | 85013 | 264 | 3.445026 | 9.09486864 | Pyropia haitanensis | 1262161 | Rhodophyta | other_Eukaryota | 60.2 | 1.44e-4 | NTclustered | gi|1067908609|gb|KU726060.1| | 1262161 | g84596 | i0 | 97.222 | 1.06439393939394 | 36 | 0 | 13 | 1 | 52 | 86 | 638 | 603 | Pyropia haitanensis large subunit ribosomal RNA gene, partial sequence | blastn | 281 | 60.2 | 1 | Eukaryota | Rhodophyta | Bangiophyceae | Bangiales | Bangiaceae | Pyropia | Pyropia haitanensis | |||
| 17286445 | 17286445 | PRJNA716463_P_NODE_71594_length_275_cov_1.955446_g71177_i0 | PRJNA716463 | 71594 | 275 | 1.955446 | 5.3774765 | Pyropia haitanensis | 1262161 | Rhodophyta | other_Eukaryota | 486 | 5.8499999999999985e-133 | NTclustered | gi|2745680298|gb|PP918987.1| | 1262161 | g71177 | i0 | 98.545 | 2 | 275 | 4 | 100 | 0 | 1 | 275 | 102054 | 102328 | Pyropia haitanensis isolate T2-4 female sex-linked region | blastn | 550 | 486 | 1 | Eukaryota | Rhodophyta | Bangiophyceae | Bangiales | Bangiaceae | Pyropia | Pyropia haitanensis | |||
| 21111362 | 21111362 | PRJNA716463_P_NODE_94017_length_257_cov_1.277174_g93600_i0 | PRJNA716463 | 94017 | 257 | 1.277174 | 3.28233718 | Pyropia haitanensis | 1262161 | Rhodophyta | other_Eukaryota | 470 | 5.45e-128 | NTclustered | gi|736075312|gb|KM655303.1| | 1262161 | g93600 | i0 | 99.611 | 1 | 257 | 1 | 100 | 0 | 1 | 257 | 68 | 324 | Pyropia haitanensis CAT mRNA, complete cds | blastn | 257 | 470 | 1 | Eukaryota | Rhodophyta | Bangiophyceae | Bangiales | Bangiaceae | Pyropia | Pyropia haitanensis | |||
| 22384782 | 22384782 | PRJNA716463_P_NODE_114318_length_238_cov_2.175758_g113900_i0 | PRJNA716463 | 114318 | 238 | 2.175758 | 5.17830404 | Pyropia yezoensis | 2788 | Rhodophyta | other_Eukaryota | 143 | 1.2299999999999998e-29 | NTclustered | gi|223588265|dbj|AB480828.1| | 2788 | g113900 | i0 | 90.654 | 0.449579831932773 | 107 | 10 | 45 | 0 | 36 | 142 | 533 | 427 | Porphyra yezoensis PyMBF1 mRNA for multiprotein bridging factor 1, complete cds | blastn | 107 | 143 | 1 | Eukaryota | Rhodophyta | Bangiophyceae | Bangiales | Bangiaceae | Pyropia | Pyropia yezoensis | |||
| 23661610 | 23661610 | PRJNA716463_P_NODE_82199_length_267_cov_1.231959_g81782_i0 | PRJNA716463 | 82199 | 267 | 1.231959 | 3.28933053 | Pyropia yezoensis | 2788 | Rhodophyta | other_Eukaryota | 361 | 3.57e-95 | NTclustered | gi|2236026315|gb|MW410947.1| | 388772 | g81782 | i0 | 91.011 | 1.9812734082397 | 267 | 24 | 100 | 0 | 1 | 267 | 1749 | 2015 | Pyropia yezoensis f. yezoensis nitrate reductase (NR) gene, partial cds | blastn | 529 | 361 | 1 | Eukaryota | Rhodophyta | Bangiophyceae | Bangiales | Bangiaceae | Pyropia | Pyropia yezoensis | |||
| 24933895 | 24933895 | PRJNA716463_P_NODE_115980_length_235_cov_3.000000_g115562_i0 | PRJNA716463 | 115980 | 235 | 3 | 7.05 | Pyropia haitanensis | 1262161 | Rhodophyta | other_Eukaryota | 422 | 1.39e-113 | NTclustered | gi|567767244|gb|KF715271.1| | 1262161 | g115562 | i0 | 99.145 | 1.99574468085106 | 234 | 2 | 99 | 0 | 1 | 234 | 2002 | 2235 | Pyropia haitanensis heat shock protein 70-5 (HSP70-5) mRNA, complete cds | blastn | 469 | 422 | 1 | Eukaryota | Rhodophyta | Bangiophyceae | Bangiales | Bangiaceae | Pyropia | Pyropia haitanensis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;