RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA716463" and tax_phylum = "Ignavibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA716463 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11396747 11396747 PRJNA716463_P_NODE_86729_length_263_cov_2.126316_g86312_i0 PRJNA716463 86729 263 2.126316 5.59221108 Bacteria 2 Bacteria Bacteria 348 2.7300000000000004e-91   NTclustered gi|1850842921|gb|CP053447.1| 2026749 g86312 i0 90.494 345.722433460076 263 25 100 0 1 263 430103 430365 Ignavibacteriae bacterium isolate IGN3 chromosome blastn 90925 348 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
16010657 16010657 PRJNA716463_P_NODE_49873_length_290_cov_3.552995_g49456_i0 PRJNA716463 49873 290 3.552995 10.3036855 Ignavibacteriales bacterium 2049428 Bacteria Bacteria 154 7.160000000000001e-33   NTclustered gi|1958088527|gb|CP065001.1| 2049428 g49456 i0 85.161 5.81724137931035 155 17 52 6 4 154 714424 714576 Ignavibacteriales bacterium isolate Kalu_18-Q3-R12-55_MAXAC.127v2 chromosome, complete genome blastn 1687 154 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales     Ignavibacteriales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;