contig_metadata
11 rows where analysis = "blastn", bioproject = "PRJNA716463" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3259340 | 3259340 | PRJNA716463_P_NODE_47663_length_292_cov_2.534247_g47246_i0 | PRJNA716463 | 47663 | 292 | 2.534247 | 7.40000124 | Gemmatimonadota bacterium | 2026742 | Bacteria | Bacteria | 239 | 1.94e-58 | NTclustered | gi|2893358400|emb|OZ220691.1| | 2026742 | g47246 | i0 | 82.034 | 135.116438356164 | 295 | 40 | 100 | 8 | 1 | 292 | 2520154 | 2519870 | MAG: Gemmatimonadota bacterium isolate 1766b9ea-3269-4cc1-97f5-695b05480569 genome assembly, chromosome: 1 | blastn | 39454 | 239 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 3259366 | 3259366 | PRJNA716463_P_NODE_49383_length_291_cov_2.004587_g48966_i0 | PRJNA716463 | 49383 | 291 | 2.004587 | 5.83334817 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 394 | 3.89e-105 | NTclustered | gi|2874254107|emb|OY970192.1| | 412054 | g48966 | i0 | 91.156 | 217.103092783505 | 294 | 20 | 100 | 5 | 1 | 291 | 1592832 | 1592542 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01721.bin.c.5 genome assembly, chromosome: 1 | blastn | 63177 | 394 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 5810912 | 5810912 | PRJNA716463_P_NODE_112985_length_240_cov_2.143713_g112567_i0 | PRJNA716463 | 112985 | 240 | 2.143713 | 5.1449112 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 220 | 5.59e-53 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g112567 | i0 | 84.348 | 168.5125 | 230 | 30 | 95 | 6 | 7 | 234 | 3042471 | 3042696 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 40443 | 220 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 7086453 | 7086453 | PRJNA716463_P_NODE_29746_length_310_cov_2.485232_g29329_i0 | PRJNA716463 | 29746 | 310 | 2.485232 | 7.7042192 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 195 | 4.5499999999999995e-45 | NTclustered | gi|2874253938|emb|OY970263.1| | 412054 | g29329 | i0 | 92.143 | 53.4322580645161 | 140 | 7 | 45 | 3 | 1 | 138 | 803621 | 803484 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02416.bin.2.26 genome assembly, chromosome: 1 | blastn | 16564 | 195 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 7086470 | 7086470 | PRJNA716463_P_NODE_3046_length_552_cov_3.256785_g2653_i0 | PRJNA716463 | 3046 | 552 | 3.256785 | 17.9774532 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 555 | 3.399999999999999e-153 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g2653 | i0 | 87.103 | 118.896739130435 | 504 | 48 | 91 | 12 | 23 | 524 | 3043758 | 3043270 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 65631 | 555 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 8360886 | 8360886 | PRJNA716463_P_NODE_16907_length_310_cov_5.523207_g16490_i0 | PRJNA716463 | 16907 | 310 | 5.523207 | 17.1219417 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 230 | 1.2499999999999995e-55 | NTclustered | gi|2874253938|emb|OY970263.1| | 412054 | g16490 | i0 | 94.079 | 33.3903225806452 | 152 | 7 | 97 | 2 | 161 | 310 | 801318 | 801167 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02416.bin.2.26 genome assembly, chromosome: 1 | blastn | 10351 | 230 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 8361400 | 8361400 | PRJNA716463_P_NODE_4967_length_469_cov_4.156566_g4561_i0 | PRJNA716463 | 4967 | 469 | 4.156566 | 19.49429454 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 361 | 6.669999999999999e-95 | NTclustered | gi|2874254107|emb|OY970192.1| | 412054 | g4561 | i0 | 80.882 | 89.319829424307 | 476 | 76 | 100 | 14 | 1 | 469 | 1594472 | 1594939 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01721.bin.c.5 genome assembly, chromosome: 1 | blastn | 41891 | 361 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 12187892 | 12187892 | PRJNA716463_P_NODE_83730_length_265_cov_3.645833_g83313_i0 | PRJNA716463 | 83730 | 265 | 3.645833 | 9.66145745 | Gemmatirosa kalamazoonensis | 861299 | Bacteria | Bacteria | 250 | 8e-62 | NTclustered | gi|575456455|gb|CP007128.1| | 861299 | g83313 | i0 | 84.191 | 29.0679245283019 | 272 | 28 | 100 | 12 | 1 | 265 | 3042752 | 3042489 | Gemmatirosa kalamazoonesis strain KBS708, complete genome | blastn | 7703 | 250 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 16010369 | 16010369 | PRJNA716463_P_NODE_30853_length_309_cov_2.627119_g30436_i0 | PRJNA716463 | 30853 | 309 | 2.627119 | 8.11779771 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 187 | 7.58e-43 | NTclustered | gi|2874253978|emb|OY970303.1| | 412054 | g30436 | i0 | 89.726 | 0.954692556634304 | 146 | 15 | 47 | 0 | 162 | 307 | 902974 | 903119 | MAG: uncultured Gemmatimonadales bacterium isolate MFD01275.bin.c.12 genome assembly, chromosome: 1 | blastn | 295 | 187 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 17285626 | 17285626 | PRJNA716463_P_NODE_15814_length_311_cov_3.508403_g15397_i0 | PRJNA716463 | 15814 | 311 | 3.508403 | 10.91113333 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 318 | 2.6e-82 | NTclustered | gi|2874253938|emb|OY970263.1| | 412054 | g15397 | i0 | 85.185 | 160.813504823151 | 297 | 38 | 95 | 5 | 18 | 311 | 802731 | 803024 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02416.bin.2.26 genome assembly, chromosome: 1 | blastn | 50013 | 318 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 23660577 | 23660577 | PRJNA716463_P_NODE_13539_length_327_cov_4.102362_g13123_i0 | PRJNA716463 | 13539 | 327 | 4.102362 | 13.41472374 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 497 | 3.29e-136 | NTclustered | gi|2874253938|emb|OY970263.1| | 412054 | g13123 | i0 | 94.969 | 219.605504587156 | 318 | 14 | 97 | 2 | 10 | 327 | 801715 | 802030 | MAG: uncultured Gemmatimonadales bacterium isolate MFD02416.bin.2.26 genome assembly, chromosome: 1 | blastn | 71811 | 497 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;