contig_metadata
334 rows where analysis = "blastn", bioproject = "PRJNA716463" and tax_phylum = "Chordata"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 707111 | 707111 | PRJNA716463_P_NODE_102121_length_249_cov_3.329545_g101704_i0 | PRJNA716463 | 102121 | 249 | 3.329545 | 8.29056705 | Rattus norvegicus | 10116 | Chordata | Chordata | 460 | 3.16e-125 | NTclustered | gi|104294895|gb|AC099431.7| | 10116 | g101704 | i0 | 100 | 12.9919678714859 | 249 | 0 | 100 | 0 | 1 | 249 | 25104 | 25352 | Rattus norvegicus BAC CH230-126C23 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence | blastn | 3235 | 460 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 707215 | 707215 | PRJNA716463_P_NODE_10861_length_359_cov_1.818182_g10447_i0 | PRJNA716463 | 10861 | 359 | 1.818182 | 6.52727338 | Sus scrofa | 9823 | Chordata | Chordata | 647 | 0 | NTclustered | gi|371916867|dbj|AK398941.1| | 9823 | g10447 | i0 | 99.167 | 9.64623955431755 | 360 | 2 | 100 | 1 | 1 | 359 | 1905 | 2264 | Sus scrofa mRNA, clone: LVRM10002H01, expressed in liver | blastn | 3463 | 647 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Suidae | Sus | Sus scrofa | |
| 707306 | 707306 | PRJNA716463_P_NODE_115121_length_236_cov_4.263804_g114703_i0 | PRJNA716463 | 115121 | 236 | 4.263804 | 10.06257744 | Rattus norvegicus | 10116 | Chordata | Chordata | 431 | 2.33e-116 | NTclustered | gi|298912478|emb|FQ214277.1| | 10116 | g114703 | i0 | 99.576 | 4.6271186440678 | 236 | 1 | 100 | 0 | 1 | 236 | 589 | 824 | Rattus norvegicus TL0AAA42YK17 mRNA sequence | blastn | 1092 | 431 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 707328 | 707328 | PRJNA716463_P_NODE_116581_length_234_cov_3.031056_g116163_i0 | PRJNA716463 | 116581 | 234 | 3.031056 | 7.09267104 | Mus musculus | 10090 | Chordata | Chordata | 427 | 2.9799999999999993e-115 | NTclustered | gi|56693384|gb|AC153795.1| | 10090 | g116163 | i0 | 99.573 | 3 | 234 | 1 | 100 | 0 | 1 | 234 | 39761 | 39994 | Mus musculus BAC RP23-276L17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence | blastn | 702 | 427 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 707405 | 707405 | PRJNA716463_P_NODE_121881_length_224_cov_4.596026_g121463_i0 | PRJNA716463 | 121881 | 224 | 4.596026 | 10.29509824 | Peromyscus maniculatus | 10042 | Chordata | Chordata | 60.2 | 1.19e-4 | NTclustered | gi|2062846887|ref|XM_006990681.3| | 230844 | g121463 | i0 | 100 | 0.142857142857143 | 32 | 0 | 14 | 0 | 89 | 120 | 3692 | 3661 | PREDICTED: Peromyscus maniculatus bairdii fer-1 like family member 6 (Fer1l6), mRNA | blastn | 32 | 60.2 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Cricetidae | Peromyscus | Peromyscus maniculatus | |
| 707766 | 707766 | PRJNA716463_P_NODE_32981_length_300_cov_2.696035_g32564_i0 | PRJNA716463 | 32981 | 300 | 2.696035 | 8.088105 | Mus musculus | 10090 | Chordata | Chordata | 472 | 1.81e-128 | NTclustered | gi|1431167909|gb|BC027328.2| | 10090 | g32564 | i0 | 94.34 | 21.89 | 318 | 0 | 100 | 1 | 1 | 300 | 286 | 603 | Mus musculus bone marrow stromal cell antigen 2, mRNA (cDNA clone MGC:28276 IMAGE:4009434), complete cds | blastn | 6567 | 472 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 707794 | 707794 | PRJNA716463_P_NODE_34461_length_299_cov_4.066372_g34044_i0 | PRJNA716463 | 34461 | 299 | 4.066372 | 12.15845228 | Rattus norvegicus | 10116 | Chordata | Chordata | 279 | 1.17e-70 | NTclustered | gi|2678878424|ref|XM_039085870.2| | 10116 | g34044 | i0 | 99.355 | 21.5785953177258 | 155 | 0 | 100 | 1 | 146 | 299 | 1567 | 1413 | PREDICTED: Rattus norvegicus splA/ryanodine receptor domain and SOCS box containing 3 (Spsb3), transcript variant X5, mRNA | blastn | 6452 | 279 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 708070 | 708070 | PRJNA716463_P_NODE_52101_length_289_cov_2.013889_g51684_i0 | PRJNA716463 | 52101 | 289 | 2.013889 | 5.82013921 | Rattus norvegicus | 10116 | Chordata | Chordata | 529 | 1.01e-145 | NTclustered | gi|298881442|emb|FQ217127.1| | 10116 | g51684 | i0 | 99.654 | 77.9446366782007 | 289 | 1 | 100 | 0 | 1 | 289 | 506 | 218 | Rattus norvegicus TL0ACA34YL21 mRNA sequence | blastn | 22526 | 529 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 708233 | 708233 | PRJNA716463_P_NODE_61881_length_282_cov_2.617225_g61464_i0 | PRJNA716463 | 61881 | 282 | 2.617225 | 7.3805745 | Odocoileus virginianus | 9874 | Chordata | Chordata | 350 | 8.239999999999999e-92 | NTclustered | gi|2871722593|ref|XR_011485664.1| | 9874 | g61464 | i0 | 96.667 | 0.74468085106383 | 210 | 7 | 74 | 0 | 1 | 210 | 610 | 401 | PREDICTED: Odocoileus virginianus uncharacterized lncRNA (LOC139033040), ncRNA | blastn | 210 | 350 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Cervidae | Odocoileus | Odocoileus virginianus | |
| 708271 | 708271 | PRJNA716463_P_NODE_6481_length_432_cov_2.910864_g6070_i0 | PRJNA716463 | 6481 | 432 | 2.910864 | 12.57493248 | Rattus norvegicus | 10116 | Chordata | Chordata | 503 | 9.58e-138 | NTclustered | gi|104294895|gb|AC099431.7| | 10116 | g6070 | i0 | 100 | 71.9351851851852 | 272 | 0 | 98 | 0 | 1 | 272 | 140565 | 140836 | Rattus norvegicus BAC CH230-126C23 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence | blastn | 31076 | 503 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 708520 | 708520 | PRJNA716463_P_NODE_81501_length_267_cov_2.670103_g81084_i0 | PRJNA716463 | 81501 | 267 | 2.670103 | 7.12917501 | Rattus norvegicus | 10116 | Chordata | Chordata | 488 | 1.5699999999999998e-133 | NTclustered | gi|55742825|ref|NM_057213.2| | 10116 | g81084 | i0 | 99.625 | 51.9438202247191 | 267 | 1 | 100 | 0 | 1 | 267 | 2100 | 1834 | Rattus norvegicus ATPase H+ transporting V1 subunit B2 (Atp6v1b2), mRNA | blastn | 13869 | 488 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 708676 | 708676 | PRJNA716463_P_NODE_91521_length_259_cov_1.655914_g91104_i0 | PRJNA716463 | 91521 | 259 | 1.655914 | 4.28881726 | Rattus norvegicus | 10116 | Chordata | Chordata | 473 | 4.25e-129 | NTclustered | gi|157816946|ref|NM_001108198.1| | 10116 | g91104 | i0 | 99.614 | 19.7953667953668 | 259 | 1 | 100 | 0 | 1 | 259 | 1554 | 1296 | Rattus norvegicus guanylate cyclase activator 1B (Guca1b), mRNA | blastn | 5127 | 473 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 708679 | 708679 | PRJNA716463_P_NODE_91681_length_259_cov_1.612903_g91264_i0 | PRJNA716463 | 91681 | 259 | 1.612903 | 4.17741877 | Mus musculus | 10090 | Chordata | Chordata | 479 | 9.13e-131 | NTclustered | gi|74141965|dbj|AK169290.1| | 10090 | g91264 | i0 | 100 | 95.4131274131274 | 259 | 0 | 100 | 0 | 1 | 259 | 1008 | 1266 | Mus musculus 16 days embryo kidney cDNA, RIKEN full-length enriched library, clone:I920176G04 product:glioma tumor suppressor candidate region gene 2, full insert sequence | blastn | 24712 | 479 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 708763 | 708763 | PRJNA716463_P_NODE_98421_length_252_cov_3.826816_g98004_i0 | PRJNA716463 | 98421 | 252 | 3.826816 | 9.64357632 | Rattus norvegicus | 10116 | Chordata | Chordata | 466 | 6.89e-127 | NTclustered | gi|2678902928|ref|XM_039094446.2| | 10116 | g98004 | i0 | 100 | 25.2619047619048 | 252 | 0 | 100 | 0 | 1 | 252 | 5145 | 5396 | PREDICTED: Rattus norvegicus nischarin (Nisch), transcript variant X1, mRNA | blastn | 6366 | 466 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 1192804 | 1192804 | PRJNA716463_P_NODE_2981_length_555_cov_6.560166_g2588_i0 | PRJNA716463 | 2981 | 555 | 6.560166 | 36.4089213 | Rattus | 10114 | Chordata | Chordata | 1020 | 0 | NTclustered | gi|1937913044|ref|NM_013023.3| | 10116 | g2588 | i0 | 99.82 | 83.8990990990991 | 555 | 1 | 100 | 0 | 1 | 555 | 920 | 1474 | Rattus norvegicus S-antigen visual arrestin (Sag), mRNA | blastn | 46564 | 1026 | 0.994152046783626 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 1193100 | 1193100 | PRJNA716463_P_NODE_79521_length_269_cov_1.571429_g79104_i0 | PRJNA716463 | 79521 | 269 | 1.571429 | 4.22714401 | Bos | 9903 | Chordata | Chordata | 108 | 5.19e-19 | NTclustered | gi|1068294018|gb|KX592814.1| | 9913 | g79104 | i0 | 96.875 | 52.8029739776952 | 64 | 2 | 25 | 0 | 206 | 269 | 8710002 | 8709939 | Bos taurus isolate Dominette_000065F genomic sequence | blastn | 14204 | 108 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 1983121 | 1983121 | PRJNA716463_P_NODE_102682_length_249_cov_1.750000_g102265_i0 | PRJNA716463 | 102682 | 249 | 1.75 | 4.3575 | Mus musculus | 10090 | Chordata | Chordata | 58.4 | 4.84e-4 | NTclustered | gi|24474481|emb|AL845292.4| | 10090 | g102265 | i0 | 90.909 | 0.176706827309237 | 44 | 2 | 18 | 2 | 108 | 151 | 79715 | 79756 | Mouse DNA sequence from clone RP23-386I21 on chromosome 2, complete sequence | blastn | 44 | 58.4 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 1983163 | 1983163 | PRJNA716463_P_NODE_105022_length_247_cov_1.770115_g104605_i0 | PRJNA716463 | 105022 | 247 | 1.770115 | 4.37218405 | Rattus norvegicus | 10116 | Chordata | Chordata | 457 | 4.05e-124 | NTclustered | gi|38512143|gb|BC061759.1| | 10116 | g104605 | i0 | 100 | 50.6882591093117 | 247 | 0 | 100 | 0 | 1 | 247 | 2493 | 2247 | Rattus norvegicus prosaposin, mRNA (cDNA clone MGC:72521 IMAGE:5600088), complete cds | blastn | 12520 | 457 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 1983172 | 1983172 | PRJNA716463_P_NODE_105682_length_246_cov_3.404624_g105264_i0 | PRJNA716463 | 105682 | 246 | 3.404624 | 8.37537504 | Rattus norvegicus | 10116 | Chordata | Chordata | 455 | 1.4500000000000002e-123 | NTclustered | gi|2678911742|ref|XR_010059742.1| | 10116 | g105264 | i0 | 100 | 7.98780487804878 | 246 | 0 | 100 | 0 | 1 | 246 | 9 | 254 | PREDICTED: Rattus norvegicus uncharacterized LOC102552068 (LOC102552068), transcript variant X4, misc_RNA | blastn | 1965 | 455 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 1983216 | 1983216 | PRJNA716463_P_NODE_109202_length_243_cov_3.123529_g108784_i0 | PRJNA716463 | 109202 | 243 | 3.123529 | 7.59017547 | Rattus norvegicus | 10116 | Chordata | Chordata | 449 | 6.65e-122 | NTclustered | gi|298899674|emb|FQ218432.1| | 10116 | g108784 | i0 | 100 | 22.8148148148148 | 243 | 0 | 100 | 0 | 1 | 243 | 1950 | 2192 | Rattus norvegicus TL0ABA52YD09 mRNA sequence | blastn | 5544 | 449 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 1983323 | 1983323 | PRJNA716463_P_NODE_11622_length_349_cov_3.380435_g11207_i0 | PRJNA716463 | 11622 | 349 | 3.380435 | 11.79771815 | Mus caroli | 10089 | Chordata | Chordata | 436 | 7.789999999999999e-118 | NTclustered | gi|1195725344|ref|XM_021165399.1| | 10089 | g11207 | i0 | 90.145 | 14.730659025788 | 345 | 21 | 98 | 6 | 2 | 344 | 2267 | 2600 | PREDICTED: Mus caroli rhodopsin (Rho), mRNA | blastn | 5141 | 436 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus caroli | |
| 1983393 | 1983393 | PRJNA716463_P_NODE_121402_length_226_cov_2.745098_g120984_i0 | PRJNA716463 | 121402 | 226 | 2.745098 | 6.20392148 | Rattus norvegicus | 10116 | Chordata | Chordata | 418 | 1.7199999999999998e-112 | NTclustered | gi|56540871|gb|BC087034.1| | 10116 | g120984 | i0 | 100 | 9.84070796460177 | 226 | 0 | 100 | 0 | 1 | 226 | 2883 | 2658 | Rattus norvegicus ATPase, Na+/K+ transporting, beta 2 polypeptide, mRNA (cDNA clone MGC:93648 IMAGE:7124310), complete cds | blastn | 2224 | 418 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 1983460 | 1983460 | PRJNA716463_P_NODE_126602_length_197_cov_4.064516_g126184_i0 | PRJNA716463 | 126602 | 197 | 4.064516 | 8.00709652 | Mus musculus | 10090 | Chordata | Chordata | 364 | 1.929999999999999e-96 | NTclustered | gi|56789389|gb|BC087924.1| | 10090 | g126184 | i0 | 100 | 46.5989847715736 | 197 | 0 | 100 | 0 | 1 | 197 | 362 | 558 | Mus musculus enoyl coenzyme A hydratase 1, peroxisomal, mRNA (cDNA clone MGC:107274 IMAGE:6706361), complete cds | blastn | 9180 | 364 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 1983492 | 1983492 | PRJNA716463_P_NODE_13622_length_326_cov_4.083004_g13206_i0 | PRJNA716463 | 13622 | 326 | 4.083004 | 13.31059304 | Rattus norvegicus | 10116 | Chordata | Chordata | 553 | 6.889999999999998e-153 | NTclustered | gi|2678862964|ref|XM_008760394.4| | 10116 | g13206 | i0 | 97.281 | 89.2944785276074 | 331 | 0 | 100 | 3 | 1 | 326 | 4296 | 3970 | PREDICTED: Rattus norvegicus pleckstrin and Sec7 domain containing (Psd), transcript variant X1, mRNA | blastn | 29110 | 553 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 1983656 | 1983656 | PRJNA716463_P_NODE_23742_length_310_cov_3.130802_g23325_i0 | PRJNA716463 | 23742 | 310 | 3.130802 | 9.7054862 | Rattus norvegicus | 10116 | Chordata | Chordata | 278 | 4.39e-70 | NTclustered | gi|298901197|emb|FQ216010.1| | 10116 | g23325 | i0 | 100 | 16.6935483870968 | 150 | 0 | 96 | 0 | 161 | 310 | 927 | 1076 | Rattus norvegicus TL0ACA45YE24 mRNA sequence | blastn | 5175 | 278 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 1984244 | 1984244 | PRJNA716463_P_NODE_61962_length_282_cov_2.473684_g61545_i0 | PRJNA716463 | 61962 | 282 | 2.473684 | 6.97578888 | Rattus norvegicus | 10116 | Chordata | Chordata | 521 | 1.6499999999999996e-143 | NTclustered | gi|291190714|ref|NM_001173972.1| | 10116 | g61545 | i0 | 100 | 6.93617021276596 | 282 | 0 | 100 | 0 | 1 | 282 | 5711 | 5430 | Rattus norvegicus integrin subunit alpha 8 (Itga8), mRNA | blastn | 1956 | 521 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 1984251 | 1984251 | PRJNA716463_P_NODE_62562_length_282_cov_1.459330_g62145_i0 | PRJNA716463 | 62562 | 282 | 1.45933 | 4.1153106 | Rattus norvegicus | 10116 | Chordata | Chordata | 507 | 4.62e-139 | NTclustered | gi|2678946800|ref|XM_063288439.1| | 10116 | g62145 | i0 | 99.286 | 21.1843971631206 | 280 | 2 | 99 | 0 | 1 | 280 | 2861 | 3140 | PREDICTED: Rattus norvegicus transmembrane protein 64 (Tmem64), transcript variant X3, mRNA | blastn | 5974 | 507 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 1984328 | 1984328 | PRJNA716463_P_NODE_67842_length_278_cov_1.502439_g67425_i0 | PRJNA716463 | 67842 | 278 | 1.502439 | 4.17678042 | Rattus norvegicus | 10116 | Chordata | Chordata | 514 | 2.7199999999999996e-141 | NTclustered | gi|52631144|gb|AY724531.1| | 10116 | g67425 | i0 | 100 | 100.028776978417 | 278 | 0 | 100 | 0 | 1 | 278 | 2082 | 2359 | Rattus norvegicus clone UI-R-FJ0-cqa-l-17-0-UI unknown mRNA | blastn | 27808 | 514 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 1984538 | 1984538 | PRJNA716463_P_NODE_80182_length_268_cov_2.810256_g79765_i0 | PRJNA716463 | 80182 | 268 | 2.810256 | 7.53148608 | Mus musculus | 10090 | Chordata | Chordata | 150 | 8.46e-32 | NTclustered | gi|57163122|emb|BX005170.27| | 10090 | g79765 | i0 | 80.808 | 0.738805970149254 | 198 | 33 | 72 | 4 | 65 | 258 | 53652 | 53456 | Mouse DNA sequence from clone RP23-430A21 on chromosome X, complete sequence | blastn | 198 | 150 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 1984659 | 1984659 | PRJNA716463_P_NODE_87702_length_262_cov_2.423280_g87285_i0 | PRJNA716463 | 87702 | 262 | 2.42328 | 6.3489936 | Rattus norvegicus | 10116 | Chordata | Chordata | 484 | 1.99e-132 | NTclustered | gi|298901571|emb|FQ221713.1| | 10116 | g87285 | i0 | 100 | 99.7671755725191 | 262 | 0 | 100 | 0 | 1 | 262 | 1378 | 1117 | Rattus norvegicus TL0ADA32YM09 mRNA sequence | blastn | 26139 | 484 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 1984744 | 1984744 | PRJNA716463_P_NODE_92222_length_258_cov_2.913514_g91805_i0 | PRJNA716463 | 92222 | 258 | 2.913514 | 7.51686612 | Mus musculus | 10090 | Chordata | Chordata | 350 | 7.44e-92 | NTclustered | gi|56236246|gb|AC142099.3| | 10090 | g91805 | i0 | 91.667 | 14.6279069767442 | 252 | 21 | 98 | 0 | 7 | 258 | 14391 | 14642 | Mus musculus BAC clone RP24-350H4 from 6, complete sequence | blastn | 3774 | 350 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 1984864 | 1984864 | PRJNA716463_P_NODE_98902_length_252_cov_2.284916_g98485_i0 | PRJNA716463 | 98902 | 252 | 2.284916 | 5.75798832 | Rattus norvegicus | 10116 | Chordata | Chordata | 466 | 6.89e-127 | NTclustered | gi|2678866168|ref|XM_039111529.2| | 10116 | g98485 | i0 | 100 | 78.4047619047619 | 252 | 0 | 100 | 0 | 1 | 252 | 1581 | 1832 | PREDICTED: Rattus norvegicus egl-9 family hypoxia-inducible factor 2 (Egln2), transcript variant X1, mRNA | blastn | 19758 | 466 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 2468374 | 2468374 | PRJNA716463_P_NODE_66762_length_279_cov_1.116505_g66345_i0 | PRJNA716463 | 66762 | 279 | 1.116505 | 3.11504895 | Muridae | 10066 | Chordata | Chordata | 388 | 1.7199999999999998e-103 | NTclustered | gi|20068654|emb|AL662803.11| | 10090 | g66345 | i0 | 92.308 | 10.0716845878136 | 273 | 21 | 98 | 0 | 1 | 273 | 143592 | 143864 | Mouse DNA sequence from clone RP23-215N10 on chromosome 11, complete sequence | blastn | 2810 | 388 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 2468403 | 2468403 | PRJNA716463_P_NODE_71082_length_275_cov_2.881188_g70665_i0 | PRJNA716463 | 71082 | 275 | 2.881188 | 7.923267 | Rattus | 10114 | Chordata | Chordata | 508 | 1.2499999999999999e-139 | NTclustered | gi|197245744|gb|BC168736.1| | 10116 | g70665 | i0 | 100 | 29.1018181818182 | 275 | 0 | 100 | 0 | 1 | 275 | 1375 | 1649 | Rattus norvegicus abhydrolase domain containing 8, mRNA (cDNA clone MGC:188830 IMAGE:6891332), complete cds | blastn | 8003 | 508 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 3258407 | 3258407 | PRJNA716463_P_NODE_100303_length_251_cov_1.679775_g99886_i0 | PRJNA716463 | 100303 | 251 | 1.679775 | 4.21623525 | Rattus norvegicus | 10116 | Chordata | Chordata | 464 | 2.47e-126 | NTclustered | gi|1958784522|ref|XM_039112870.1| | 10116 | g99886 | i0 | 100 | 19.9123505976096 | 251 | 0 | 100 | 0 | 1 | 251 | 1790 | 1540 | PREDICTED: Rattus norvegicus legumain (Lgmn), transcript variant X1, mRNA | blastn | 4998 | 464 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 3258646 | 3258646 | PRJNA716463_P_NODE_115163_length_236_cov_3.944785_g114745_i0 | PRJNA716463 | 115163 | 236 | 3.944785 | 9.3096926 | Rattus norvegicus | 10116 | Chordata | Chordata | 436 | 4.999999999999999e-118 | NTclustered | gi|1937902134|ref|NM_001008326.2| | 10116 | g114745 | i0 | 100 | 45.6864406779661 | 236 | 0 | 100 | 0 | 1 | 236 | 1177 | 942 | Rattus norvegicus RNA exonuclease 2 (Rexo2), mRNA; nuclear gene for mitochondrial product | blastn | 10782 | 436 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 3258705 | 3258705 | PRJNA716463_P_NODE_119623_length_229_cov_2.794872_g119205_i0 | PRJNA716463 | 119623 | 229 | 2.794872 | 6.40025688 | Rattus norvegicus | 10116 | Chordata | Chordata | 424 | 3.76e-114 | NTclustered | gi|2678966577|ref|XM_063266064.1| | 10116 | g119205 | i0 | 100 | 12.8384279475983 | 229 | 0 | 100 | 0 | 1 | 229 | 4008 | 3780 | PREDICTED: Rattus norvegicus collagen type V alpha 3 chain (Col5a3), transcript variant X3, mRNA | blastn | 2940 | 424 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 3258719 | 3258719 | PRJNA716463_P_NODE_12063_length_343_cov_7.762963_g11648_i0 | PRJNA716463 | 12063 | 343 | 7.762963 | 26.62696309 | Fukomys damarensis | 885580 | Chordata | Chordata | 52.8 | 0.032 | NTclustered | gi|1834361251|ref|XM_010619451.3| | 885580 | g11648 | i0 | 100 | 0.73469387755102 | 28 | 0 | 8 | 0 | 114 | 141 | 11645 | 11618 | PREDICTED: Fukomys damarensis WD repeat and FYVE domain containing 3 (Wdfy3), transcript variant X4, mRNA | blastn | 252 | 52.8 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Bathyergidae | Fukomys | Fukomys damarensis | |
| 3258747 | 3258747 | PRJNA716463_P_NODE_122423_length_221_cov_4.290541_g122005_i0 | PRJNA716463 | 122423 | 221 | 4.290541 | 9.48209561 | Rattus norvegicus | 10116 | Chordata | Chordata | 409 | 1.0100000000000001e-109 | NTclustered | gi|2678967700|ref|XM_056984524.2| | 10116 | g122005 | i0 | 100 | 28.4027149321267 | 221 | 0 | 100 | 0 | 1 | 221 | 10728 | 10948 | PREDICTED: Rattus norvegicus vacuolar protein sorting 13 homolog C (Vps13c), transcript variant X4, mRNA | blastn | 6277 | 409 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 3258953 | 3258953 | PRJNA716463_P_NODE_21963_length_310_cov_3.379747_g21546_i0 | PRJNA716463 | 21963 | 310 | 3.379747 | 10.4772157 | Rattus norvegicus | 10116 | Chordata | Chordata | 438 | 1.9e-118 | NTclustered | gi|2678903521|ref|XM_063275506.1| | 10116 | g21546 | i0 | 90.634 | 65.5451612903226 | 331 | 10 | 100 | 2 | 1 | 310 | 3523 | 3193 | PREDICTED: Rattus norvegicus SURP and G patch domain containing 2 (Sugp2), transcript variant X6, mRNA | blastn | 20319 | 438 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 3259173 | 3259173 | PRJNA716463_P_NODE_37263_length_299_cov_3.013274_g36846_i0 | PRJNA716463 | 37263 | 299 | 3.013274 | 9.00968926 | Rattus norvegicus | 10116 | Chordata | Chordata | 285 | 2.52e-72 | NTclustered | gi|2678881548|ref|XR_358018.5| | 10116 | g36846 | i0 | 100 | 72.4147157190636 | 154 | 0 | 100 | 0 | 1 | 154 | 100 | 253 | PREDICTED: Rattus norvegicus matrix remodeling associated 7 (Mxra7), transcript variant X3, misc_RNA | blastn | 21652 | 285 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 3259438 | 3259438 | PRJNA716463_P_NODE_54163_length_288_cov_1.181395_g53746_i0 | PRJNA716463 | 54163 | 288 | 1.181395 | 3.4024176 | Rattus norvegicus | 10116 | Chordata | Chordata | 527 | 3.63e-145 | NTclustered | gi|298898969|emb|FQ212220.1| | 10116 | g53746 | i0 | 99.653 | 2 | 288 | 1 | 100 | 0 | 1 | 288 | 5541 | 5828 | Rattus norvegicus TL0AAA65YC10 mRNA sequence | blastn | 576 | 527 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 3259465 | 3259465 | PRJNA716463_P_NODE_56023_length_286_cov_3.023474_g55606_i0 | PRJNA716463 | 56023 | 286 | 3.023474 | 8.64713564 | Mus musculus | 10090 | Chordata | Chordata | 523 | 4.659999999999998e-144 | NTclustered | gi|30911037|emb|AL929079.14| | 10090 | g55606 | i0 | 99.65 | 3 | 286 | 1 | 100 | 0 | 1 | 286 | 36126 | 35841 | Mouse DNA sequence from clone RP23-387F9 on chromosome 2, complete sequence | blastn | 858 | 523 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 3259496 | 3259496 | PRJNA716463_P_NODE_58783_length_284_cov_3.170616_g58366_i0 | PRJNA716463 | 58783 | 284 | 3.170616 | 9.00454944 | Rattus norvegicus | 10116 | Chordata | Chordata | 525 | 1.2899999999999994e-144 | NTclustered | gi|298881588|emb|FQ220004.1| | 10116 | g58366 | i0 | 100 | 76.2077464788732 | 284 | 0 | 100 | 0 | 1 | 284 | 792 | 509 | Rattus norvegicus TL0ADA44YI16 mRNA sequence | blastn | 21643 | 525 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 3259604 | 3259604 | PRJNA716463_P_NODE_64423_length_280_cov_3.086957_g64006_i0 | PRJNA716463 | 64423 | 280 | 3.086957 | 8.6434796 | Rattus norvegicus | 10116 | Chordata | Chordata | 518 | 2.12e-142 | NTclustered | gi|71051375|gb|BC099176.1| | 10116 | g64006 | i0 | 100 | 34.1714285714286 | 280 | 0 | 100 | 0 | 1 | 280 | 853 | 1132 | Rattus norvegicus family with sequence similarity 40, member A, mRNA (cDNA clone IMAGE:7382712), partial cds | blastn | 9568 | 518 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 3259641 | 3259641 | PRJNA716463_P_NODE_66483_length_279_cov_1.495146_g66066_i0 | PRJNA716463 | 66483 | 279 | 1.495146 | 4.17145734 | Mus musculus | 10090 | Chordata | Chordata | 516 | 7.58e-142 | NTclustered | gi|1907206284|ref|XM_006527706.5| | 10090 | g66066 | i0 | 100 | 50.2114695340502 | 279 | 0 | 100 | 0 | 1 | 279 | 523 | 801 | PREDICTED: Mus musculus EF-hand domain (C-terminal) containing 2 (Efhc2), transcript variant X1, mRNA | blastn | 14009 | 516 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 3259747 | 3259747 | PRJNA716463_P_NODE_72963_length_274_cov_1.965174_g72546_i0 | PRJNA716463 | 72963 | 274 | 1.965174 | 5.38457676 | Rattus norvegicus | 10116 | Chordata | Chordata | 499 | 7.48e-137 | NTclustered | gi|2678880430|ref|XM_063269519.1| | 10116 | g72546 | i0 | 99.635 | 7.91970802919708 | 274 | 0 | 100 | 1 | 1 | 274 | 5574 | 5846 | PREDICTED: Rattus norvegicus RNA polymerase II subunit A (Polr2a), transcript variant X2, mRNA | blastn | 2170 | 499 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 3259806 | 3259806 | PRJNA716463_P_NODE_76743_length_271_cov_2.116162_g76326_i0 | PRJNA716463 | 76743 | 271 | 2.116162 | 5.73479902 | Mus musculus | 10090 | Chordata | Chordata | 204 | 6.479999999999998e-48 | NTclustered | gi|354790363|gb|JN954864.1| | 10090 | g76326 | i0 | 82.239 | 4.77859778597786 | 259 | 25 | 93 | 6 | 1 | 252 | 29992 | 30236 | Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Whrn:tm3a(EUCOMM)Wtsi; transgenic | blastn | 1295 | 204 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 3259870 | 3259870 | PRJNA716463_P_NODE_80223_length_268_cov_2.697436_g79806_i0 | PRJNA716463 | 80223 | 268 | 2.697436 | 7.22912848 | Rattus norvegicus | 10116 | Chordata | Chordata | 490 | 4.39e-134 | NTclustered | gi|726965664|gb|KM577635.1| | 10116 | g79806 | i0 | 99.627 | 99.9850746268657 | 268 | 1 | 100 | 0 | 1 | 268 | 9113 | 9380 | Rattus norvegicus isolate 67 mitochondrion, complete genome | blastn | 26796 | 490 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 3259903 | 3259903 | PRJNA716463_P_NODE_82363_length_266_cov_4.082902_g81946_i0 | PRJNA716463 | 82363 | 266 | 4.082902 | 10.86051932 | Rattus norvegicus | 10116 | Chordata | Chordata | 486 | 5.629999999999999e-133 | NTclustered | gi|2678970650|ref|XM_063267104.1| | 10116 | g81946 | i0 | 99.624 | 30 | 266 | 1 | 100 | 0 | 1 | 266 | 2364 | 2099 | PREDICTED: Rattus norvegicus tight junction associated protein 1 (Tjap1), transcript variant X16, mRNA | blastn | 7980 | 486 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 3744388 | 3744388 | PRJNA716463_P_NODE_11763_length_347_cov_4.255474_g11348_i0 | PRJNA716463 | 11763 | 347 | 4.255474 | 14.76649478 | Rattus | 10114 | Chordata | Chordata | 627 | 4.2899999999999987e-175 | NTclustered | gi|1937907478|ref|NM_013021.2| | 10116 | g11348 | i0 | 99.422 | 18.0662824207493 | 346 | 0 | 99 | 1 | 2 | 347 | 1559 | 1216 | Rattus norvegicus peripherin 2 (Prph2), mRNA | blastn | 6269 | 628 | 0.998407643312102 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 3744406 | 3744406 | PRJNA716463_P_NODE_12123_length_343_cov_3.029630_g11708_i0 | PRJNA716463 | 12123 | 343 | 3.02963 | 10.3916309 | Mus | 10088 | Chordata | Chordata | 634 | 2.5299999999999996e-177 | NTclustered | gi|846387676|dbj|LC061971.1| | 10090 | g11708 | i0 | 100 | 100 | 343 | 0 | 100 | 0 | 1 | 343 | 1626 | 1284 | Mus musculus mitochondrion DNA, including COX1, tRNA-Ser, tRNA-Asp, COX2, tRNA-Lys, ATP8, ATP6 genes, complete sequence, sequence_id: (5951..8605)_20 | blastn | 34300 | 634 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 4535445 | 4535445 | PRJNA716463_P_NODE_101064_length_250_cov_2.824859_g100647_i0 | PRJNA716463 | 101064 | 250 | 2.824859 | 7.0621475 | Mus musculus | 10090 | Chordata | Chordata | 156 | 1.68e-33 | NTclustered | gi|21998271|emb|AL805973.6| | 10090 | g100647 | i0 | 88.148 | 151.672 | 135 | 10 | 52 | 4 | 120 | 248 | 109603 | 109737 | Mouse DNA sequence from clone RP23-69G24 on chromosome 4, complete sequence | blastn | 37918 | 156 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 4535473 | 4535473 | PRJNA716463_P_NODE_10324_length_366_cov_2.621160_g9910_i0 | PRJNA716463 | 10324 | 366 | 2.62116 | 9.5934456 | Rattus norvegicus | 10116 | Chordata | Chordata | 676 | 0 | NTclustered | gi|298908397|emb|FQ228750.1| | 10116 | g9910 | i0 | 100 | 48.0437158469945 | 366 | 0 | 100 | 0 | 1 | 366 | 1556 | 1191 | Rattus norvegicus TL0ADA52YC18 mRNA sequence | blastn | 17584 | 676 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 4535547 | 4535547 | PRJNA716463_P_NODE_10884_length_358_cov_4.529825_g10470_i0 | PRJNA716463 | 10884 | 358 | 4.529825 | 16.2167735 | Rattus norvegicus | 10116 | Chordata | Chordata | 514 | 3.5999999999999996e-141 | NTclustered | gi|298882364|emb|FQ222948.1| | 10116 | g10470 | i0 | 91.223 | 102.974860335196 | 376 | 15 | 100 | 1 | 1 | 358 | 703 | 328 | Rattus norvegicus TL0ADA17YF02 mRNA sequence | blastn | 36865 | 514 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 4535588 | 4535588 | PRJNA716463_P_NODE_111564_length_241_cov_2.857143_g111146_i0 | PRJNA716463 | 111564 | 241 | 2.857143 | 6.88571463 | Mus musculus | 10090 | Chordata | Chordata | 435 | 1.84e-117 | NTclustered | gi|39540561|gb|AC102566.9| | 10090 | g111146 | i0 | 99.17 | 4 | 241 | 2 | 100 | 0 | 1 | 241 | 158241 | 158481 | Mus musculus chromosome 9, clone RP23-223D10, complete sequence | blastn | 964 | 435 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 4535625 | 4535625 | PRJNA716463_P_NODE_113764_length_238_cov_5.042424_g113346_i0 | PRJNA716463 | 113764 | 238 | 5.042424 | 12.00096912 | Rattus norvegicus | 10116 | Chordata | Chordata | 440 | 3.899999999999999e-119 | NTclustered | gi|145279185|ref|NM_057100.2| | 10116 | g113346 | i0 | 100 | 13.0546218487395 | 238 | 0 | 100 | 0 | 1 | 238 | 2236 | 2473 | Rattus norvegicus growth arrest specific 6 (Gas6), mRNA | blastn | 3107 | 440 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 4535737 | 4535737 | PRJNA716463_P_NODE_120864_length_227_cov_2.681818_g120446_i0 | PRJNA716463 | 120864 | 227 | 2.681818 | 6.08772686 | Mus musculus | 10090 | Chordata | Chordata | 414 | 2.2399999999999998e-111 | NTclustered | gi|38304319|gb|AC107755.12| | 10090 | g120446 | i0 | 99.561 | 1.00440528634361 | 228 | 0 | 100 | 1 | 1 | 227 | 120519 | 120746 | Mus musculus chromosome 9, clone RP23-225C11, complete sequence | blastn | 228 | 414 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 4536074 | 4536074 | PRJNA716463_P_NODE_27904_length_310_cov_2.738397_g27487_i0 | PRJNA716463 | 27904 | 310 | 2.738397 | 8.4890307 | Bos taurus | 9913 | Chordata | Chordata | 466 | 8.73e-127 | NTclustered | gi|402745660|ref|NM_001046513.2| | 9913 | g27487 | i0 | 92.308 | 104.161290322581 | 325 | 10 | 100 | 1 | 1 | 310 | 67 | 391 | Bos taurus chemokine (C-X-C motif) ligand 3 (CXCL3), mRNA | blastn | 32290 | 466 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 4536756 | 4536756 | PRJNA716463_P_NODE_70064_length_276_cov_2.226601_g69647_i0 | PRJNA716463 | 70064 | 276 | 2.226601 | 6.14541876 | Bos taurus | 9913 | Chordata | Chordata | 505 | 1.62e-138 | NTclustered | gi|1717507386|ref|NM_001029846.2| | 9913 | g69647 | i0 | 99.638 | 61.9166666666667 | 276 | 1 | 100 | 0 | 1 | 276 | 4371 | 4646 | Bos taurus 2',5'-oligoadenylate synthetase 1, 40/46kDa (OAS1Z), mRNA | blastn | 17089 | 505 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 4536827 | 4536827 | PRJNA716463_P_NODE_74544_length_273_cov_1.445000_g74127_i0 | PRJNA716463 | 74544 | 273 | 1.445 | 3.94485 | Rattus norvegicus | 10116 | Chordata | Chordata | 499 | 7.45e-137 | NTclustered | gi|2678947058|ref|XM_039110881.2| | 10116 | g74127 | i0 | 99.634 | 7.76923076923077 | 273 | 1 | 100 | 0 | 1 | 273 | 1947 | 2219 | PREDICTED: Rattus norvegicus protein tyrosine phosphatase 4A2 (Ptp4a2), transcript variant X4, mRNA | blastn | 2121 | 499 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 4537100 | 4537100 | PRJNA716463_P_NODE_89304_length_261_cov_1.585106_g88887_i0 | PRJNA716463 | 89304 | 261 | 1.585106 | 4.13712666 | Rattus norvegicus | 10116 | Chordata | Chordata | 483 | 7.12e-132 | NTclustered | gi|33354291|gb|AC112406.5| | 10116 | g88887 | i0 | 100 | 1 | 261 | 0 | 100 | 0 | 1 | 261 | 140159 | 139899 | Rattus norvegicus 11 BAC CH230-329D3 (Children's Hospital Oakland Research Institute) complete sequence | blastn | 261 | 483 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 4537204 | 4537204 | PRJNA716463_P_NODE_96944_length_254_cov_1.701657_g96527_i0 | PRJNA716463 | 96944 | 254 | 1.701657 | 4.32220878 | Rattus norvegicus | 10116 | Chordata | Chordata | 470 | 5.37e-128 | NTclustered | gi|209447118|ref|NM_001135840.1| | 10116 | g96527 | i0 | 100 | 69.9566929133858 | 254 | 0 | 100 | 0 | 1 | 254 | 838 | 1091 | Rattus norvegicus GTP binding protein 6 (putative) (Gtpbp6), mRNA | blastn | 17769 | 470 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 5020988 | 5020988 | PRJNA716463_P_NODE_11824_length_346_cov_8.956044_g11409_i0 | PRJNA716463 | 11824 | 346 | 8.956044 | 30.98791224 | Rattus | 10114 | Chordata | Chordata | 634 | 2.5599999999999996e-177 | NTclustered | gi|187960166|gb|BC166770.1| | 10116 | g11409 | i0 | 99.711 | 99.1849710982659 | 346 | 1 | 100 | 0 | 1 | 346 | 1917 | 1572 | Rattus norvegicus cDNA clone IMAGE:7934005 | blastn | 34318 | 634 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 5021184 | 5021184 | PRJNA716463_P_NODE_38044_length_299_cov_2.836283_g37627_i0 | PRJNA716463 | 38044 | 299 | 2.836283 | 8.48048617 | Bos | 9903 | Chordata | Chordata | 477 | 3.8699999999999984e-130 | NTclustered | gi|2633723705|ref|XM_061438284.1| | 9906 | g37627 | i0 | 94.904 | 104.19397993311 | 314 | 1 | 100 | 1 | 1 | 299 | 98 | 411 | PREDICTED: Bos javanicus ribosomal protein L8 (RPL8), transcript variant X1, mRNA | blastn | 31154 | 477 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos javanicus | |
| 5810805 | 5810805 | PRJNA716463_P_NODE_106485_length_246_cov_0.890173_g106067_i0 | PRJNA716463 | 106485 | 246 | 0.890173 | 2.18982558 | Mus musculus | 10090 | Chordata | Chordata | 213 | 9.63e-51 | NTclustered | gi|20177349|emb|AL691478.5| | 10090 | g106067 | i0 | 100 | 1.86991869918699 | 115 | 0 | 47 | 0 | 64 | 178 | 70580 | 70466 | Mouse DNA sequence from clone RP23-137F6 on chromosome 3, complete sequence | blastn | 460 | 213 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 5810867 | 5810867 | PRJNA716463_P_NODE_110565_length_242_cov_2.514793_g110147_i0 | PRJNA716463 | 110565 | 242 | 2.514793 | 6.08579906 | Rattus norvegicus | 10116 | Chordata | Chordata | 438 | 1.4299999999999999e-118 | NTclustered | gi|157820454|ref|NM_001109384.1| | 10116 | g110147 | i0 | 100 | 70.9297520661157 | 237 | 0 | 98 | 0 | 6 | 242 | 737 | 501 | Rattus norvegicus alkB homolog 7 (Alkbh7), mRNA; nuclear gene for mitochondrial product | blastn | 17165 | 438 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 5811010 | 5811010 | PRJNA716463_P_NODE_119505_length_229_cov_3.275641_g119087_i0 | PRJNA716463 | 119505 | 229 | 3.275641 | 7.50121789 | Rattus norvegicus | 10116 | Chordata | Chordata | 424 | 3.76e-114 | NTclustered | gi|2195004362|ref|NM_001401615.1| | 10116 | g119087 | i0 | 100 | 20.1397379912664 | 229 | 0 | 100 | 0 | 1 | 229 | 3512 | 3740 | Rattus norvegicus RUN and FYVE domain containing 3 (Rufy3), transcript variant 3, mRNA | blastn | 4612 | 424 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 5811100 | 5811100 | PRJNA716463_P_NODE_126765_length_196_cov_4.113821_g126347_i0 | PRJNA716463 | 126765 | 196 | 4.113821 | 8.06308916 | Rattus norvegicus | 10116 | Chordata | Chordata | 363 | 6.899999999999998e-96 | NTclustered | gi|2678964409|ref|XM_039081341.2| | 10116 | g126347 | i0 | 100 | 99.0969387755102 | 196 | 0 | 100 | 0 | 1 | 196 | 1461 | 1656 | PREDICTED: Rattus norvegicus centrosomal protein 57 (Cep57), transcript variant X6, mRNA | blastn | 19423 | 363 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 5811105 | 5811105 | PRJNA716463_P_NODE_12925_length_334_cov_3.980843_g12510_i0 | PRJNA716463 | 12925 | 334 | 3.980843 | 13.29601562 | Manacus candei | 415023 | Chordata | Chordata | 54.7 | 0.009 | NTclustered | gi|2325443574|ref|XM_051811551.1| | 415023 | g12510 | i0 | 96.97 | 0.0988023952095808 | 33 | 0 | 10 | 1 | 12 | 44 | 2812 | 2843 | PREDICTED: Manacus candei choline dehydrogenase (CHDH), mRNA | blastn | 33 | 54.7 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Passeriformes | Pipridae | Manacus | Manacus candei | |
| 5811188 | 5811188 | PRJNA716463_P_NODE_18025_length_310_cov_4.434599_g17608_i0 | PRJNA716463 | 18025 | 310 | 4.434599 | 13.7472569 | Rattus norvegicus | 10116 | Chordata | Chordata | 278 | 4.39e-70 | NTclustered | gi|2678863939|ref|XR_005500363.2| | 10116 | g17608 | i0 | 100 | 21.6516129032258 | 150 | 0 | 97 | 0 | 161 | 310 | 1209 | 1060 | PREDICTED: Rattus norvegicus calpain, small subunit 1 (Capns1), transcript variant X1, misc_RNA | blastn | 6712 | 278 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 5811401 | 5811401 | PRJNA716463_P_NODE_32405_length_301_cov_4.381579_g31988_i0 | PRJNA716463 | 32405 | 301 | 4.381579 | 13.18855279 | Rattus norvegicus | 10116 | Chordata | Chordata | 455 | 1.83e-123 | NTclustered | gi|56775|emb|X04084.1| | 10116 | g31988 | i0 | 93.438 | 2.51162790697674 | 320 | 0 | 100 | 3 | 1 | 301 | 3139 | 2822 | Rat ribosomal DNA nontranscribed spacer (partial) | blastn | 756 | 455 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 5811524 | 5811524 | PRJNA716463_P_NODE_4105_length_497_cov_5.507075_g3705_i0 | PRJNA716463 | 4105 | 497 | 5.507075 | 27.37016275 | Mus musculus | 10090 | Chordata | Chordata | 588 | 2.99e-163 | NTclustered | gi|1204322234|gb|M55171.2|MUSOPS | 10090 | g3705 | i0 | 91.076 | 12.374245472837 | 437 | 36 | 87 | 2 | 61 | 494 | 8975 | 9411 | Mouse opsin (MOPS) gene, complete cds | blastn | 6150 | 588 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 5811758 | 5811758 | PRJNA716463_P_NODE_56065_length_286_cov_2.906103_g55648_i0 | PRJNA716463 | 56065 | 286 | 2.906103 | 8.31145458 | Cairina moschata | 8855 | Chordata | Chordata | 481 | 2.84e-131 | NTclustered | gi|2921976312|gb|CP130421.1| | 8855 | g55648 | i0 | 96.875 | 1.00699300699301 | 288 | 7 | 100 | 1 | 1 | 286 | 6803133 | 6802846 | Cairina moschata breed yongchun chromosome 6 | blastn | 288 | 481 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Aves | Anseriformes | Anatidae | Cairina | Cairina moschata | |
| 5811988 | 5811988 | PRJNA716463_P_NODE_69745_length_276_cov_3.034483_g69328_i0 | PRJNA716463 | 69745 | 276 | 3.034483 | 8.37517308 | Mus musculus | 10090 | Chordata | Chordata | 505 | 1.62e-138 | NTclustered | gi|54606951|gb|AC121299.16| | 10090 | g69328 | i0 | 99.638 | 2.8804347826087 | 276 | 1 | 100 | 0 | 1 | 276 | 152034 | 152309 | Mus musculus chromosome 17, clone RP23-402P8, complete sequence | blastn | 795 | 505 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 5812170 | 5812170 | PRJNA716463_P_NODE_81905_length_267_cov_1.871134_g81488_i0 | PRJNA716463 | 81905 | 267 | 1.871134 | 4.99592778 | Rattus norvegicus | 10116 | Chordata | Chordata | 488 | 1.5699999999999998e-133 | NTclustered | gi|40317606|gb|AY212508.1| | 10116 | g81488 | i0 | 99.625 | 61.3707865168539 | 267 | 1 | 100 | 0 | 1 | 267 | 880 | 1146 | Rattus norvegicus rod outer segment membrane protein 1 (Rom1), complete cds | blastn | 16386 | 488 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 5812199 | 5812199 | PRJNA716463_P_NODE_83785_length_265_cov_3.432292_g83368_i0 | PRJNA716463 | 83785 | 265 | 3.432292 | 9.0955738 | Bos taurus | 9913 | Chordata | Chordata | 484 | 2.0199999999999998e-132 | NTclustered | gi|2587618257|ref|XR_009493754.1| | 9913 | g83368 | i0 | 99.623 | 13.0603773584906 | 265 | 1 | 100 | 0 | 1 | 265 | 3588 | 3324 | PREDICTED: Bos taurus uncharacterized lncRNA (LOC132344790), transcript variant X2, ncRNA | blastn | 3461 | 484 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos taurus | |
| 5812233 | 5812233 | PRJNA716463_P_NODE_8585_length_392_cov_4.673981_g8172_i0 | PRJNA716463 | 8585 | 392 | 4.673981 | 18.32200552 | Rattus norvegicus | 10116 | Chordata | Chordata | 723 | 0 | NTclustered | gi|39645152|gb|BC063811.1| | 10116 | g8172 | i0 | 100 | 98.4948979591837 | 391 | 0 | 99 | 0 | 2 | 392 | 1377 | 987 | Rattus norvegicus ribosomal protein L4, mRNA (cDNA clone MGC:72833 IMAGE:6919340), complete cds | blastn | 38610 | 723 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 5812392 | 5812392 | PRJNA716463_P_NODE_95205_length_255_cov_4.115385_g94788_i0 | PRJNA716463 | 95205 | 255 | 4.115385 | 10.49423175 | Rattus norvegicus | 10116 | Chordata | Chordata | 472 | 1.5e-128 | NTclustered | gi|298899300|emb|FQ215661.1| | 10116 | g94788 | i0 | 100 | 99.0509803921569 | 255 | 0 | 100 | 0 | 1 | 255 | 904 | 650 | Rattus norvegicus TL0ACA47YE20 mRNA sequence | blastn | 25258 | 472 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 5812452 | 5812452 | PRJNA716463_P_NODE_98985_length_252_cov_2.134078_g98568_i0 | PRJNA716463 | 98985 | 252 | 2.134078 | 5.37787656 | Rattus norvegicus | 10116 | Chordata | Chordata | 466 | 6.89e-127 | NTclustered | gi|157817024|ref|NM_001106476.1| | 10116 | g98568 | i0 | 100 | 4.16666666666667 | 252 | 0 | 100 | 0 | 1 | 252 | 1922 | 2173 | Rattus norvegicus methionyl aminopeptidase 1 (Metap1), mRNA | blastn | 1050 | 466 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 6296666 | 6296666 | PRJNA716463_P_NODE_107985_length_244_cov_3.385965_g107567_i0 | PRJNA716463 | 107985 | 244 | 3.385965 | 8.2617546 | Rattus | 10114 | Chordata | Chordata | 451 | 1.86e-122 | NTclustered | gi|436778|dbj|D26073.1|RATPSAP | 10116 | g107567 | i0 | 100 | 97.4877049180328 | 244 | 0 | 100 | 0 | 1 | 244 | 1224 | 981 | Rattus norvegicus mRNA for phosphoribosylpyrophosphate synthetase-associated protein (39 kDa), complete cds | blastn | 23787 | 451 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 6297151 | 6297151 | PRJNA716463_P_NODE_83505_length_266_cov_1.191710_g83088_i0 | PRJNA716463 | 83505 | 266 | 1.19171 | 3.1699486 | Mus | 10088 | Chordata | Chordata | 492 | 1.2099999999999999e-134 | NTclustered | gi|756142290|gb|KP260515.1| | 10090 | g83088 | i0 | 100 | 100 | 266 | 0 | 100 | 0 | 1 | 266 | 3356 | 3621 | Mus musculus strain ME mitochondrion, complete genome | blastn | 26600 | 492 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 7085773 | 7085773 | PRJNA716463_P_NODE_100026_length_251_cov_2.258427_g99609_i0 | PRJNA716463 | 100026 | 251 | 2.258427 | 5.66865177 | Mus musculus | 10090 | Chordata | Chordata | 453 | 5.34e-123 | NTclustered | gi|56606318|gb|AC119220.11| | 10090 | g99609 | i0 | 99.203 | 1 | 251 | 2 | 100 | 0 | 1 | 251 | 52265 | 52015 | Mus musculus chromosome 1, clone RP24-201K16, complete sequence | blastn | 251 | 453 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 7085913 | 7085913 | PRJNA716463_P_NODE_108686_length_244_cov_0.900585_g108268_i0 | PRJNA716463 | 108686 | 244 | 0.900585 | 2.1974274 | Rattus norvegicus | 10116 | Chordata | Chordata | 446 | 8.639999999999999e-121 | NTclustered | gi|2708395107|ref|NM_001256465.3| | 10116 | g108268 | i0 | 100 | 2.98770491803279 | 241 | 0 | 99 | 0 | 1 | 241 | 3206 | 3446 | Rattus norvegicus copine 1 (Cpne1), mRNA | blastn | 729 | 446 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 7085937 | 7085937 | PRJNA716463_P_NODE_110266_length_242_cov_3.562130_g109848_i0 | PRJNA716463 | 110266 | 242 | 3.56213 | 8.6203546 | Rattus norvegicus | 10116 | Chordata | Chordata | 448 | 2.3799999999999995e-121 | NTclustered | gi|2415900878|ref|NM_001415034.1| | 10116 | g109848 | i0 | 100 | 17.099173553719 | 242 | 0 | 100 | 0 | 1 | 242 | 3966 | 3725 | Rattus norvegicus SIN3 transcription regulator family member B (Sin3b), transcript variant 2, mRNA | blastn | 4138 | 448 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 7085941 | 7085941 | PRJNA716463_P_NODE_110666_length_242_cov_2.266272_g110248_i0 | PRJNA716463 | 110666 | 242 | 2.266272 | 5.48437824 | Rattus norvegicus | 10116 | Chordata | Chordata | 448 | 2.3799999999999995e-121 | NTclustered | gi|56090418|ref|NM_001007676.1| | 10116 | g110248 | i0 | 100 | 12.8595041322314 | 242 | 0 | 100 | 0 | 1 | 242 | 973 | 732 | Rattus norvegicus translocase of inner mitochondrial membrane domain containing 1 (Timmdc1), mRNA; nuclear gene for mitochondrial product | blastn | 3112 | 448 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 7085981 | 7085981 | PRJNA716463_P_NODE_11326_length_353_cov_3.296429_g10911_i0 | PRJNA716463 | 11326 | 353 | 3.296429 | 11.63639437 | Rattus norvegicus | 10116 | Chordata | Chordata | 588 | 2.0599999999999994e-163 | NTclustered | gi|2678867815|ref|XM_039099119.2| | 10116 | g10911 | i0 | 97.167 | 100.543909348442 | 353 | 0 | 100 | 1 | 1 | 353 | 4327 | 3985 | PREDICTED: Rattus norvegicus erythrocyte membrane protein band 4.1-like 2 (Epb41l2), transcript variant X24, mRNA | blastn | 35492 | 588 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 7086099 | 7086099 | PRJNA716463_P_NODE_120106_length_228_cov_3.167742_g119688_i0 | PRJNA716463 | 120106 | 228 | 3.167742 | 7.22245176 | Rattus norvegicus | 10116 | Chordata | Chordata | 422 | 1.34e-113 | NTclustered | gi|91980279|gb|DQ455823.1| | 10116 | g119688 | i0 | 100 | 37.7587719298246 | 228 | 0 | 100 | 0 | 1 | 228 | 1751 | 1978 | Rattus norvegicus MFGE8 long form mRNA, complete cds, alternatively spliced | blastn | 8609 | 422 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 7086280 | 7086280 | PRJNA716463_P_NODE_18806_length_310_cov_4.075949_g18389_i0 | PRJNA716463 | 18806 | 310 | 4.075949 | 12.6354419 | Rattus norvegicus | 10116 | Chordata | Chordata | 278 | 4.39e-70 | NTclustered | gi|2784630610|ref|NM_001433240.1| | 10116 | g18389 | i0 | 100 | 6.75483870967742 | 150 | 0 | 96 | 0 | 161 | 310 | 3505 | 3356 | Rattus norvegicus coiled-coil domain containing 85C (Ccdc85c), transcript variant 2, mRNA | blastn | 2094 | 278 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 7086639 | 7086639 | PRJNA716463_P_NODE_40726_length_298_cov_3.013333_g40309_i0 | PRJNA716463 | 40726 | 298 | 3.013333 | 8.97973234 | Mus musculus | 10090 | Chordata | Chordata | 545 | 1.04e-150 | NTclustered | gi|56236326|gb|AC140461.4| | 10090 | g40309 | i0 | 99.666 | 7.11409395973154 | 299 | 0 | 100 | 1 | 1 | 298 | 115913 | 116211 | Mus musculus BAC clone RP23-11M24 from 1, complete sequence | blastn | 2120 | 545 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 7086858 | 7086858 | PRJNA716463_P_NODE_55246_length_287_cov_1.789720_g54829_i0 | PRJNA716463 | 55246 | 287 | 1.78972 | 5.1364964 | Rattus norvegicus | 10116 | Chordata | Chordata | 523 | 4.6799999999999984e-144 | NTclustered | gi|2678879622|ref|XM_006247619.5| | 10116 | g54829 | i0 | 99.652 | 22.8501742160279 | 287 | 0 | 100 | 1 | 1 | 287 | 2419 | 2134 | PREDICTED: Rattus norvegicus solute carrier family 16, member 6 (Slc16a6), transcript variant X3, mRNA | blastn | 6558 | 523 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 7086907 | 7086907 | PRJNA716463_P_NODE_58266_length_285_cov_1.452830_g57849_i0 | PRJNA716463 | 58266 | 285 | 1.45283 | 4.1405655 | Rattus norvegicus | 10116 | Chordata | Chordata | 527 | 3.59e-145 | NTclustered | gi|2393986391|gb|OM502741.1| | 10116 | g57849 | i0 | 100 | 100 | 285 | 0 | 100 | 0 | 1 | 285 | 314 | 30 | Rattus norvegicus isolate PL6767 cytochrome b (CYTB) gene, partial cds; mitochondrial | blastn | 28500 | 527 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 7087024 | 7087024 | PRJNA716463_P_NODE_65226_length_280_cov_1.487923_g64809_i0 | PRJNA716463 | 65226 | 280 | 1.487923 | 4.1661844 | Mus musculus | 10090 | Chordata | Chordata | 95.3 | 4.23e-15 | NTclustered | gi|72534995|gb|AC160958.2| | 10090 | g64809 | i0 | 87.952 | 26.275 | 83 | 7 | 29 | 3 | 92 | 172 | 162078 | 161997 | Mus musculus BAC clone RP24-224I13 from chromosome 13, complete sequence | blastn | 7357 | 95.3 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 7087280 | 7087280 | PRJNA716463_P_NODE_80786_length_268_cov_1.579487_g80369_i0 | PRJNA716463 | 80786 | 268 | 1.579487 | 4.23302516 | Rattus norvegicus | 10116 | Chordata | Chordata | 496 | 9.429999999999999e-136 | NTclustered | gi|2678951275|ref|XM_006239771.5| | 10116 | g80369 | i0 | 100 | 16.3544776119403 | 268 | 0 | 100 | 0 | 1 | 268 | 5102 | 4835 | PREDICTED: Rattus norvegicus photoreceptor cilium actin regulator (Pcare), transcript variant X1, mRNA | blastn | 4383 | 496 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 7087333 | 7087333 | PRJNA716463_P_NODE_8366_length_396_cov_2.978328_g7953_i0 | PRJNA716463 | 8366 | 396 | 2.978328 | 11.79417888 | Mus musculus | 10090 | Chordata | Chordata | 388 | 2.54e-103 | NTclustered | gi|28972446|dbj|AK122395.1| | 10090 | g7953 | i0 | 88.125 | 80.209595959596 | 320 | 27 | 100 | 8 | 1 | 311 | 4580 | 4263 | Mus musculus premature mRNA for mKIAA0890 protein | blastn | 31763 | 388 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Mus | Mus musculus | |
| 7087379 | 7087379 | PRJNA716463_P_NODE_8706_length_390_cov_4.249211_g8293_i0 | PRJNA716463 | 8706 | 390 | 4.249211 | 16.5719229 | Rattus norvegicus | 10116 | Chordata | Chordata | 721 | 0 | NTclustered | gi|2678863041|ref|XM_006230009.5| | 10116 | g8293 | i0 | 100 | 10.5923076923077 | 390 | 0 | 100 | 0 | 1 | 390 | 3628 | 4017 | PREDICTED: Rattus norvegicus dickkopf WNT signaling pathway inhibitor 3 (Dkk3), transcript variant X2, mRNA | blastn | 4131 | 721 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 7087409 | 7087409 | PRJNA716463_P_NODE_89506_length_260_cov_4.422460_g89089_i0 | PRJNA716463 | 89506 | 260 | 4.42246 | 11.498396 | Rattus norvegicus | 10116 | Chordata | Chordata | 479 | 9.17e-131 | NTclustered | gi|2678895339|ref|XM_039092046.2| | 10116 | g89089 | i0 | 100 | 57.9769230769231 | 259 | 0 | 99 | 0 | 1 | 259 | 5775 | 5517 | PREDICTED: Rattus norvegicus myotubularin related protein 3 (Mtmr3), transcript variant X11, mRNA | blastn | 15074 | 479 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 7087503 | 7087503 | PRJNA716463_P_NODE_95486_length_255_cov_2.961538_g95069_i0 | PRJNA716463 | 95486 | 255 | 2.961538 | 7.5519219 | Rattus norvegicus | 10116 | Chordata | Chordata | 472 | 1.5e-128 | NTclustered | gi|298903561|emb|FQ212572.1| | 10116 | g95069 | i0 | 100 | 83.7450980392157 | 255 | 0 | 100 | 0 | 1 | 255 | 512 | 258 | Rattus norvegicus TL0AAA52YJ07 mRNA sequence | blastn | 21355 | 472 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus | |
| 7570608 | 7570608 | PRJNA716463_P_NODE_17186_length_310_cov_5.097046_g16769_i0 | PRJNA716463 | 17186 | 310 | 5.097046 | 15.8008426 | Bovidae | 9895 | Chordata | Chordata | 278 | 4.39e-70 | NTclustered | gi|2633867324|ref|XM_061417809.1| | 9906 | g16769 | i0 | 100 | 41.9129032258065 | 150 | 0 | 95 | 0 | 161 | 310 | 1833 | 1982 | PREDICTED: Bos javanicus cyclin dependent kinase inhibitor 1B (CDKN1B), mRNA | blastn | 12993 | 278 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Artiodactyla | Bovidae | Bos | Bos javanicus | |
| 7570956 | 7570956 | PRJNA716463_P_NODE_83286_length_266_cov_1.595855_g82869_i0 | PRJNA716463 | 83286 | 266 | 1.595855 | 4.2449743 | Rattus | 10114 | Chordata | Chordata | 333 | 7.759999999999999e-87 | NTclustered | gi|2678959573|ref|XM_006240987.4| | 10116 | g82869 | i0 | 100 | 67.3270676691729 | 180 | 0 | 79 | 0 | 87 | 266 | 4364 | 4543 | PREDICTED: Rattus norvegicus mitogen activated protein kinase kinase 2 (Map2k2), transcript variant X3, mRNA | blastn | 17909 | 333 | 1 | Eukaryota | Opisthokonta | Metazoa | Chordata | Mammalia | Rodentia | Muridae | Rattus | Rattus norvegicus |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;