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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA716463" and tax_phylum = "Acidobacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 12 ✖

tax_kingdom 1

bioproject 1

  • PRJNA716463 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3258990 3258990 PRJNA716463_P_NODE_2423_length_606_cov_9.150094_g2041_i0 PRJNA716463 2423 606 9.150094 55.44956964 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 754 0   NTclustered gi|31789464|gb|AY281356.1| 171953 g2041 i0 96.689 366.990099009901 453 15 100 0 154 606 10633 11085 Uncultured Acidobacteria bacterium clone 41b15 genomic sequence blastn 222396 754 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
4535801 4535801 PRJNA716463_P_NODE_125504_length_203_cov_4.646154_g125086_i0 PRJNA716463 125504 203 4.646154 9.43169262 Geothrix sp. 21YS21S-2 3068893 Bacteria Bacteria 152 1.7e-32   NTclustered gi|2566094019|gb|CP132910.1| 3068893 g125086 i0 84.516 174.064039408867 155 22 76 2 50 203 4251516 4251363 Geothrix sp. 21YS21S-2 chromosome, complete genome blastn 35335 152 1 Bacteria   Pseudomonadati Acidobacteriota Holophagae Holophagales Holophagaceae Geothrix Geothrix sp. 21YS21S-2
4536451 4536451 PRJNA716463_P_NODE_52524_length_289_cov_1.425926_g52107_i0 PRJNA716463 52524 289 1.425926 4.12092614 Holophagales bacterium 2478486 Bacteria Bacteria 204 6.98e-48   NTclustered gi|1958024485|gb|CP064972.1| 2478486 g52107 i0 80.934 23.560553633218 257 49 89 0 3 259 2677867 2678123 Holophagales bacterium isolate EsbW_18-Q3-R4-48_BAT3C.4_cln chromosome, complete genome blastn 6809 204 1 Bacteria   Pseudomonadati Acidobacteriota Holophagae Holophagales     Holophagales bacterium
8361883 8361883 PRJNA716463_P_NODE_81427_length_267_cov_2.845361_g81010_i0 PRJNA716463 81427 267 2.845361 7.59711387 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 246 1.0399999999999999e-60   NTclustered gi|2874254091|emb|OY970174.1| 171953 g81010 i0 84.615 0.925093632958802 247 38 93 0 1 247 2035634 2035880 MAG: uncultured Acidobacteriota bacterium isolate MFD01275.bin.c.18 genome assembly, chromosome: 1 blastn 247 246 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
9636485 9636485 PRJNA716463_P_NODE_46048_length_293_cov_3.859091_g45631_i0 PRJNA716463 46048 293 3.859091 11.30713663 Candidatus Acidiferrales bacterium 2952895 Bacteria Bacteria 147 1.21e-30   NTclustered gi|2874253786|emb|OY969770.1| 2952895 g45631 i0 84.868 45 152 15 51 5 4 151 1539151 1539004 MAG: Candidatus Acidoferrales bacterium isolate MFD09222.bin.1.52 genome assembly, chromosome: 1 blastn 13185 147 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Candidatus Acidiferrales     Candidatus Acidiferrales bacterium
10911781 10911781 PRJNA716463_P_NODE_2669_length_581_cov_6.970472_g2282_i0 PRJNA716463 2669 581 6.970472 40.49844232 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 363 2.33e-95   NTclustered gi|2893358450|emb|OZ220742.1| 2651171 g2282 i0 78.866 179.895008605852 582 89 97 31 13 576 746374 745809 MAG: Thermoanaerobaculia bacterium isolate 0db66e92-d31a-4200-8262-fff8455c21c0 genome assembly, chromosome: 1 blastn 104519 363 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
12187051 12187051 PRJNA716463_P_NODE_27950_length_310_cov_2.734177_g27533_i0 PRJNA716463 27950 310 2.734177 8.4759487 Thermoanaerobaculia bacterium 2651171 Bacteria Bacteria 52.8 0.029   NTclustered gi|2621703956|emb|OY762911.1| 2651171 g27533 i0 100 0.0903225806451613 28 0 9 0 216 243 2087059 2087086 MAG: Thermoanaerobaculia bacterium isolate 14c23368-4dca-4d55-9b94-f295180eceef genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria   Pseudomonadati Acidobacteriota Thermoanaerobaculia       Thermoanaerobaculia bacterium
16009739 16009739 PRJNA716463_P_NODE_10413_length_364_cov_13.697595_g9999_i0 PRJNA716463 10413 364 13.697595 49.8592458 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 302 3.11e-77   NTclustered gi|2874254108|emb|OY970193.1| 171953 g9999 i0 82.065 2.0521978021978 368 52 100 13 1 364 4472496 4472139 MAG: uncultured Acidobacteriota bacterium isolate MFD09206.bin.1.42 genome assembly, chromosome: 1 blastn 747 302 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
19835752 19835752 PRJNA716463_P_NODE_96056_length_255_cov_1.659341_g95639_i0 PRJNA716463 96056 255 1.659341 4.23131955 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 217 7.76e-52   NTclustered gi|2874253931|emb|OY970256.1| 2283092 g95639 i0 82.031 12.7529411764706 256 44 100 2 1 255 2131671 2131417 MAG: Pyrinomonadaceae bacterium isolate MFD09212.bin.c.2 genome assembly, chromosome: 1 blastn 3252 217 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
22385814 22385814 PRJNA716463_P_NODE_68078_length_277_cov_6.024510_g67661_i0 PRJNA716463 68078 277 6.02451 16.6878927 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 82.4 3.25e-11   NTclustered gi|2874253744|emb|OY969603.1| 171953 g67661 i0 84.27 0.32129963898917 89 8 31 5 167 252 74499 74414 MAG: uncultured Acidobacteriota bacterium isolate MFD01476.bin.c.1 genome assembly, chromosome: 1 blastn 89 82.4 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
22386282 22386282 PRJNA716463_P_NODE_98878_length_252_cov_2.307263_g98461_i0 PRJNA716463 98878 252 2.307263 5.81430276 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 431 2.5099999999999992e-116   NTclustered gi|2874254091|emb|OY970174.1| 171953 g98461 i0 97.61 339.376984126984 251 6 99 0 2 252 4358315 4358565 MAG: uncultured Acidobacteriota bacterium isolate MFD01275.bin.c.18 genome assembly, chromosome: 1 blastn 85523 431 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
24933898 24933898 PRJNA716463_P_NODE_116200_length_235_cov_2.327160_g115782_i0 PRJNA716463 116200 235 2.32716 5.468826 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 377 3.06e-100   NTclustered gi|2874254167|emb|OY970399.1| 171953 g115782 i0 95.745 214.897872340426 235 9 99 1 1 234 2286347 2286581 MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.6 genome assembly, chromosome: 1 blastn 50501 377 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;