RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA716463" and tax_kingdom = "Loebvirae"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Loebvirae · 8 ✖

bioproject 1

  • PRJNA716463 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7086370 7086370 PRJNA716463_P_NODE_24486_length_310_cov_3.037975_g24069_i0 PRJNA716463 24486 310 3.037975 9.4177225 Inoviridae sp. 2219103 Viruses Viruses 255 2.06e-63   NTclustered gi|2056866535|tpg|BK044602.1| 2219103 g24069 i0 97.333 2.70645161290323 150 4 72 0 161 310 49588 49737 MAG TPA_asm: Inoviridae sp. isolate ct5hk1, partial genome blastn 839 255 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
13461290 13461290 PRJNA716463_P_NODE_20991_length_310_cov_3.527426_g20574_i0 PRJNA716463 20991 310 3.527426 10.9350206 Inoviridae sp. 2219103 Viruses Viruses 272 2.04e-68   NTclustered gi|2056866535|tpg|BK044602.1| 2219103 g20574 i0 99.333 2.90967741935484 150 1 97 0 161 310 57489 57340 MAG TPA_asm: Inoviridae sp. isolate ct5hk1, partial genome blastn 902 272 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
14737006 14737006 PRJNA716463_P_NODE_48592_length_291_cov_3.637615_g48175_i0 PRJNA716463 48592 291 3.637615 10.58545965 Inoviridae sp. 2219103 Viruses Viruses 538 1.6999999999999994e-148   NTclustered gi|2057831706|tpg|BK055554.1| 2219103 g48175 i0 100 75.0378006872852 291 0 100 0 1 291 3145 2855 MAG TPA_asm: Inoviridae sp. isolate ctTZp11, partial genome blastn 21836 538 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
17286792 17286792 PRJNA716463_P_NODE_93654_length_257_cov_2.195652_g93237_i0 PRJNA716463 93654 257 2.195652 5.64282564 Inoviridae sp. 2219103 Viruses Viruses 250 7.72e-62   NTclustered gi|2059777179|tpg|BK039263.1| 2219103 g93237 i0 84.314 6.53307392996109 255 40 99 0 1 255 584 838 MAG TPA_asm: Inoviridae sp. isolate ctaGf1, partial genome blastn 1679 250 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
18560386 18560386 PRJNA716463_P_NODE_79615_length_269_cov_1.418367_g79198_i0 PRJNA716463 79615 269 1.418367 3.81540723 Inoviridae sp. 2219103 Viruses Viruses 414 2.73e-111   NTclustered gi|2056866535|tpg|BK044602.1| 2219103 g79198 i0 94.424 3 269 15 100 0 1 269 71037 70769 MAG TPA_asm: Inoviridae sp. isolate ct5hk1, partial genome blastn 807 414 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
18560492 18560492 PRJNA716463_P_NODE_86195_length_263_cov_3.573684_g85778_i0 PRJNA716463 86195 263 3.573684 9.39878892 Inoviridae sp. 2219103 Viruses Viruses 453 5.63e-123   NTclustered gi|2056866535|tpg|BK044602.1| 2219103 g85778 i0 97.719 2.99619771863118 263 6 100 0 1 263 54759 54497 MAG TPA_asm: Inoviridae sp. isolate ct5hk1, partial genome blastn 788 453 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
19045009 19045009 PRJNA716463_P_NODE_99355_length_251_cov_5.348315_g98938_i0 PRJNA716463 99355 251 5.348315 13.42427065 root 1 Root_unresolved Root_unresolved 375 1.1899999999999998e-99   NTclustered gi|2056837707|tpg|BK044060.1| 2219103 g98938 i0 93.625 8.0597609561753 251 16 100 0 1 251 3430 3680 MAG TPA_asm: Inoviridae sp. isolate ctXjl4, partial genome blastn 2023 375 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.
19834968 19834968 PRJNA716463_P_NODE_49716_length_290_cov_4.539171_g49299_i0 PRJNA716463 49716 290 4.539171 13.1635959 Inoviridae sp. 2219103 Viruses Viruses 250 8.87e-62   NTclustered gi|2056866535|tpg|BK044602.1| 2219103 g49299 i0 96.104 3.07241379310345 154 5 100 1 138 290 66657 66810 MAG TPA_asm: Inoviridae sp. isolate ct5hk1, partial genome blastn 891 250 1 Viruses   Loebvirae Hofneiviricota Faserviricetes Tubulavirales Inoviridae   Inoviridae sp.

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;