RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA715462" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA715462 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3256863 3256863 PRJNA715462_P_NODE_21983_length_390_cov_1.719243_g21187_i0 PRJNA715462 21983 390 1.719243 6.7050477 Linderina pennispora 61395 Fungi Fungi 119 3.62e-22   NTclustered gi|2028311994|ref|XM_040883102.1| 61395 g21187 i0 78.571 1.45897435897436 182 37 46 2 184 364 1118 938 Linderina pennispora uncharacterized protein (DL89DRAFT_11075), mRNA blastn 569 119 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
9634385 9634385 PRJNA715462_P_NODE_36348_length_292_cov_1.621005_g35552_i0 PRJNA715462 36348 292 1.621005 4.7333346 Basidiobolus ranarum 34480 Fungi Fungi 187 7.109999999999998e-43   NTclustered gi|358030849|dbj|AB609158.1| 34480 g35552 i0 82.018 71.458904109589 228 33 77 8 55 278 961 1184 Basidiobolus ranarum EF2 gene for translation elongation factor 2, partial cds, strain: NRRL 34594 blastn 20866 187 1 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus ranarum
14734889 14734889 PRJNA715462_P_NODE_39192_length_283_cov_1.809524_g38396_i0 PRJNA715462 39192 283 1.809524 5.12095292 Linderina pennispora 61395 Fungi Fungi 178 4.13e-40   NTclustered gi|2028325628|ref|XM_040891481.1| 61395 g38396 i0 86.875 45.1342756183746 160 19 56 2 57 215 227 69 Linderina pennispora catalase (DL89DRAFT_324752), partial mRNA blastn 12773 178 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;