RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA715462" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA715462 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
706388 706388 PRJNA715462_P_NODE_63861_length_244_cov_0.900585_g63065_i0 PRJNA715462 63861 244 0.900585 2.1974274 Opitutales bacterium 2026772 Bacteria Bacteria 52.8 0.022   NTclustered gi|2891482117|emb|OZ219851.1| 2026772 g63065 i0 96.774 0.127049180327869 31 1 13 0 90 120 1524794 1524764 MAG: Opitutales bacterium isolate e4292735-b3b5-42df-bce3-ad3ef7a88f44 genome assembly, chromosome: 10 blastn 31 52.8 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales     Opitutales bacterium
5809524 5809524 PRJNA715462_P_NODE_36645_length_291_cov_1.412844_g35849_i0 PRJNA715462 36645 291 1.412844 4.11137604 Oleiharenicola sp. Vm1 3398393 Bacteria Bacteria 195 4.23e-45   NTclustered gi|2912653302|gb|CP180537.1| 3398393 g35849 i0 80.153 73.3676975945017 262 50 90 2 31 291 3051575 3051835 Oleiharenicola sp. Vm1 chromosome, complete genome blastn 21350 195 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Oleiharenicola Oleiharenicola sp. Vm1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;