RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA715462" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA715462 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1981610 1981610 PRJNA715462_P_NODE_25542_length_356_cov_6.795053_g24746_i0 PRJNA715462 25542 356 6.795053 24.19038868 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 442 1.7099999999999995e-119   NTclustered gi|68479954|gb|DQ076149.1| 6182 g24746 i0 89.076 1.00280898876405 357 37 100 2 1 356 12 367 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 357 442 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
4534456 4534456 PRJNA715462_P_NODE_47224_length_260_cov_1.058824_g46428_i0 PRJNA715462 47224 260 1.058824 2.7529424 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.024   NTclustered gi|690650432|emb|LN198122.1| 99802 g46428 i0 100 0.107692307692308 28 0 11 0 12 39 924 897 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0169275 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
5809757 5809757 PRJNA715462_P_NODE_47625_length_259_cov_0.913978_g46829_i0 PRJNA715462 47625 259 0.913978 2.36720302 Monotoplana cf. diorchis 104924 Platyhelminthes Platyhelminthes 73.1 1.81e-8   NTclustered gi|10944981|emb|AJ270174.1| 104924 g46829 i0 100 21.2586872586873 39 0 15 0 128 166 1595 1633 Monotoplana cf. diorchis partial 28S rRNA gene blastn 5506 73.1 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Proseriata Monotoplanidae Monotoplana Monotoplana cf. diorchis
8359662 8359662 PRJNA715462_P_NODE_62387_length_245_cov_0.895349_g61591_i0 PRJNA715462 62387 245 0.895349 2.19360505 Schmidtea mediterranea 79327 Platyhelminthes Platyhelminthes 405 1.47e-108   NTclustered gi|21308618|gb|AY067985.1| 79327 g61591 i0 95.935 1.00408163265306 246 9 100 1 1 245 562 317 Schmidtea mediterranea clone H.51.12a unknown mRNA sequence blastn 246 405 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Dugesiidae Schmidtea Schmidtea mediterranea
19833366 19833366 PRJNA715462_P_NODE_67376_length_242_cov_0.911243_g66580_i0 PRJNA715462 67376 242 0.911243 2.20520806 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.022   NTclustered gi|690596878|emb|LN150304.1| 99802 g66580 i0 100 0.115702479338843 28 0 12 0 87 114 1774 1801 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0136384 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
21108064 21108064 PRJNA715462_P_NODE_26217_length_351_cov_1.823741_g25421_i0 PRJNA715462 26217 351 1.823741 6.40133091 Dicrocoelium dendriticum 57078 Platyhelminthes Platyhelminthes 52.8 0.033   NTclustered gi|687572767|emb|LK586392.1| 57078 g25421 i0 100 0.0797720797720798 28 0 8 0 122 149 310 337 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_scaffold0178600 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
24932762 24932762 PRJNA715462_P_NODE_52900_length_250_cov_0.870056_g52104_i0 PRJNA715462 52900 250 0.870056 2.17514 Echinococcus multilocularis 6211 Platyhelminthes Platyhelminthes 113 1.02e-20   NTclustered gi|29467009|dbj|AB071181.1| 6211 g52104 i0 84.348 3.116 115 18 46 0 135 249 262 148 Echinococcus multilocularis EmDLC mRNA for dynein light chain, complete cds blastn 779 113 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Echinococcus Echinococcus multilocularis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;