RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA715462" and tax_phylum = "Negarnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Negarnaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA715462 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17770019 17770019 PRJNA715462_P_NODE_62814_length_244_cov_1.350877_g62018_i0 PRJNA715462 62814 244 1.350877 3.29613988 Viruses 10239 Viruses Viruses 440 4.019999999999999e-119   NTclustered gi|2177952863|gb|OL452263.1| 2900479 g62018 i0 99.18 3.99590163934426 244 2 100 0 1 244 6480 6237 MAG: Brine shrimp chuvirus 1 isolate CHN/15, complete genome blastn 975 440 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae   brine shrimp chuvirus 1
22382722 22382722 PRJNA715462_P_NODE_1038_length_2589_cov_13.558824_g845_i0 PRJNA715462 1038 2589 13.558824 351.03795336 brine shrimp chuvirus 1 2900479 Viruses Viruses 95.3 4.4e-14   NTclustered gi|2177952885|gb|OL452274.1| 2900479 g845 i0 90.278 0.166473541908073 72 7 3 0 2517 2588 7030 7101 MAG: Brine shrimp chuvirus 1 isolate YC/91, complete genome blastn 431 95.3 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae   brine shrimp chuvirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;