RNAquarium Metadata Server
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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA715462" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 10 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA715462 · 10 ✖

analysis 1

  • blastn · 10 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
705831 705831 PRJNA715462_P_NODE_35041_length_298_cov_1.986667_g34245_i0 PRJNA715462 35041 298 1.986667 5.92026766 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 56.5 0.002   NTclustered gi|2782863103|ref|XM_067059373.1| 252671 g34245 i0 100 0.100671140939597 30 0 10 0 182 211 1090 1061 PREDICTED: Clytia hemisphaerica malate dehydrogenase, cytoplasmic-like (LOC136802621), mRNA blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
706315 706315 PRJNA715462_P_NODE_58941_length_247_cov_0.885057_g58145_i0 PRJNA715462 58941 247 0.885057 2.18609079 Anemonia sulcata 6108 Cnidaria other_Eukaryota 52.8 0.022   NTclustered gi|2917940687|emb|OZ237555.1| 6108 g58145 i0 100 0.11336032388664 28 0 11 0 127 154 16930281 16930308 Anemonia sulcata genome assembly, chromosome: 1 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
706520 706520 PRJNA715462_P_NODE_7301_length_846_cov_2.657180_g6600_i0 PRJNA715462 7301 846 2.65718 22.4797428 Orbicella faveolata 48498 Cnidaria other_Eukaryota 54.7 0.024   NTclustered gi|1176081934|ref|XM_020755445.1| 48498 g6600 i0 94.444 0.0425531914893617 36 1 4 1 666 701 721 687 PREDICTED: Orbicella faveolata cysteine-rich motor neuron 1 protein-like (LOC110049639), mRNA blastn 36 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Merulinidae Orbicella Orbicella faveolata
5809089 5809089 PRJNA715462_P_NODE_19005_length_428_cov_2.436620_g18209_i0 PRJNA715462 19005 428 2.43662 10.4287336 Pocillopora verrucosa 203993 Cnidaria other_Eukaryota 54.7 0.011   NTclustered gi|2751551215|ref|XM_059101251.2| 203993 g18209 i0 100 0.198598130841121 29 0 7 0 351 379 1575 1547 PREDICTED: Pocillopora verrucosa sialin (LOC131784448), mRNA blastn 85 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Pocillopora Pocillopora verrucosa
6296340 6296340 PRJNA715462_P_NODE_51625_length_251_cov_0.865169_g50829_i0 PRJNA715462 51625 251 0.865169 2.17157419 Montipora 46703 Cnidaria other_Eukaryota 87.9 6.24e-13   NTclustered gi|2812126610|ref|XM_068876348.1| 246305 g50829 i0 82.178 2.51394422310757 101 18 40 0 150 250 5313 5213 PREDICTED: Montipora capricornis DNA-directed RNA polymerase II subunit RPB1-like (LOC138028746), mRNA blastn 631 87.9 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Montipora Montipora capricornis
9634379 9634379 PRJNA715462_P_NODE_36008_length_294_cov_1.045249_g35212_i0 PRJNA715462 36008 294 1.045249 3.07303206 Anemonia sulcata 6108 Cnidaria other_Eukaryota 56.5 0.002   NTclustered gi|2917940731|emb|OZ237564.1| 6108 g35212 i0 87.755 0.166666666666667 49 5 16 1 229 276 8791919 8791871 Anemonia sulcata genome assembly, chromosome: 10 blastn 49 56.5 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
14735391 14735391 PRJNA715462_P_NODE_64332_length_244_cov_0.883041_g63536_i0 PRJNA715462 64332 244 0.883041 2.15462004 Anemonia sulcata 6108 Cnidaria other_Eukaryota 52.8 0.022   NTclustered gi|2917940724|emb|OZ237563.1| 6108 g63536 i0 100 0.114754098360656 28 0 11 0 214 241 12285937 12285964 Anemonia sulcata genome assembly, chromosome: 9 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
15220783 15220783 PRJNA715462_P_NODE_3252_length_1455_cov_3.163531_g2813_i0 PRJNA715462 3252 1455 3.163531 46.02937605 Metazoa 33208 Cnidaria other_Eukaryota 54.7 0.042   NTclustered gi|2257885181|ref|XM_032377135.2| 45351 g2813 i0 100 0.0398625429553265 29 0 2 0 438 466 1750 1722 PREDICTED: Nematostella vectensis homeobox protein notochord (LOC5508358), mRNA blastn 58 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Edwardsiidae Nematostella Nematostella vectensis
17284203 17284203 PRJNA715462_P_NODE_50094_length_251_cov_5.382022_g49298_i0 PRJNA715462 50094 251 5.382022 13.50887522 Parvicapsula minibicornis 109801 Cnidaria other_Eukaryota 137 6.100000000000001e-28   NTclustered gi|605060084|gb|KF874224.1| 109801 g49298 i0 86.992 50.7888446215139 123 14 49 2 129 251 233 353 Parvicapsula minibicornis 28S ribosomal RNA gene, partial sequence blastn 12748 137 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Bivalvulida Parvicapsulidae Parvicapsula Parvicapsula minibicornis
23658270 23658270 PRJNA715462_P_NODE_12259_length_582_cov_1.202358_g11470_i0 PRJNA715462 12259 582 1.202358 6.99772356 Hydra vulgaris 6087 Cnidaria other_Eukaryota 564 5.97e-156   NTclustered gi|2744840495|ref|XR_010635829.1| 6087 g11470 i0 89.865 4.19587628865979 444 38 76 7 131 570 311 751 PREDICTED: Hydra vulgaris uncharacterized LOC136075315 (LOC136075315), ncRNA blastn 2442 564 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;