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contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJNA715462" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 13 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA715462 · 13 ✖

analysis 1

  • blastn · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1981922 1981922 PRJNA715462_P_NODE_38902_length_284_cov_1.459716_g38106_i0 PRJNA715462 38902 284 1.459716 4.14559344 Polychytrium aggregatum 110093 Fungi Fungi 230 1.1299999999999995e-55   NTclustered gi|2432147654|ref|XM_053111044.1| 110093 g38106 i0 83.74 81.2887323943662 246 36 86 4 9 252 1267 1024 Polychytrium aggregatum Enolase, C-terminal TIM barrel domain-containing protein (BJ171DRAFT_505639), mRNA blastn 23086 230 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
6296311 6296311 PRJNA715462_P_NODE_41425_length_276_cov_5.423645_g40629_i0 PRJNA715462 41425 276 5.423645 14.9692602 Fungi 4751 Fungi Fungi 121 6.859999999999999e-23   NTclustered gi|2432138713|ref|XM_053107478.1| 110093 g40629 i0 84.252 9.44202898550725 127 16 45 3 145 269 148 24 Polychytrium aggregatum large subunit ribosomal protein 29 (BJ171DRAFT_421272), partial mRNA blastn 2606 122 0.991803278688525 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
8359443 8359443 PRJNA715462_P_NODE_49787_length_252_cov_2.513966_g48991_i0 PRJNA715462 49787 252 2.513966 6.33519432 Polychytrium aggregatum 110093 Fungi Fungi 91.6 4.84e-14   NTclustered gi|2432141660|ref|XM_053114031.1| 110093 g48991 i0 85.882 8.97222222222222 85 12 34 0 12 96 167 251 Polychytrium aggregatum uncharacterized protein (BJ171DRAFT_580257), partial mRNA blastn 2261 91.6 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
12185204 12185204 PRJNA715462_P_NODE_37810_length_287_cov_17.084112_g37014_i0 PRJNA715462 37810 287 17.084112 49.03140144 Polychytrium aggregatum 110093 Fungi Fungi 121 7.169999999999999e-23   NTclustered gi|2432138713|ref|XM_053107478.1| 110093 g37014 i0 84.252 7.4808362369338 127 16 44 3 150 274 148 24 Polychytrium aggregatum large subunit ribosomal protein 29 (BJ171DRAFT_421272), partial mRNA blastn 2147 121 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
14734777 14734777 PRJNA715462_P_NODE_33472_length_306_cov_1.442060_g32676_i0 PRJNA715462 33472 306 1.44206 4.4127036 Polychytrium aggregatum 110093 Fungi Fungi 121 7.709999999999999e-23   NTclustered gi|2432172390|ref|XM_053112626.1| 110093 g32676 i0 80.892 7.43464052287582 157 27 50 1 59 212 1811 1655 Polychytrium aggregatum chaperonin Cpn60/TCP-1 family (BJ171DRAFT_525041), mRNA blastn 2275 121 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
17283779 17283779 PRJNA715462_P_NODE_3034_length_1510_cov_3.547669_g2611_i0 PRJNA715462 3034 1510 3.547669 53.5698019 Polychytrium aggregatum 110093 Fungi Fungi 970 0   NTclustered gi|2432145256|ref|XM_053110808.1| 110093 g2611 i0 82.715 74.7860927152318 1105 177 73 13 397 1494 1800 703 Polychytrium aggregatum hsp71-like protein (BJ171DRAFT_502900), mRNA blastn 112927 970 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
17284675 17284675 PRJNA715462_P_NODE_9714_length_687_cov_18.811075_g8950_i0 PRJNA715462 9714 687 18.811075 129.23208525 Polychytrium aggregatum 110093 Fungi Fungi 195 1.0800000000000001e-44   NTclustered gi|2432162630|ref|XM_053112000.1| 110093 g8950 i0 76.238 20.2663755458515 404 74 58 16 216 611 523 134 Polychytrium aggregatum ribosomal protein L22/L17 (BJ171DRAFT_515986), mRNA blastn 13923 195 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
19833243 19833243 PRJNA715462_P_NODE_60096_length_246_cov_0.890173_g59300_i0 PRJNA715462 60096 246 0.890173 2.18982558 Synchytrium microbalum 1806994 Fungi Fungi 75 4.74e-9   NTclustered gi|1759154564|ref|XM_031169821.1| 1806994 g59300 i0 93.878 0.898373983739837 49 3 20 0 198 246 212 164 Synchytrium microbalum uncharacterized protein (SmJEL517_g03893), partial mRNA blastn 221 75 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium microbalum
21107795 21107795 PRJNA715462_P_NODE_16417_length_473_cov_2.027500_g15621_i0 PRJNA715462 16417 473 2.0275 9.590075 Polychytrium aggregatum 110093 Fungi Fungi 429 1.8199999999999998e-115   NTclustered gi|2432171462|ref|XM_053112561.1| 110093 g15621 i0 84.222 90.9725158562368 450 61 94 8 29 473 838 1282 Polychytrium aggregatum heat shock protein 90 kDa (BJ171DRAFT_524257), mRNA blastn 43030 429 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
21594471 21594471 PRJNA715462_P_NODE_27777_length_340_cov_1.584270_g26981_i0 PRJNA715462 27777 340 1.58427 5.386518 Eukaryota 2759 Fungi Fungi 261 4.900000000000001e-65   NTclustered gi|2432151540|ref|XM_053108788.1| 110093 g26981 i0 83.63 16.0176470588235 281 42 82 4 56 334 918 640 Polychytrium aggregatum uncharacterized protein (BJ171DRAFT_475566), partial mRNA blastn 5446 261 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
22382906 22382906 PRJNA715462_P_NODE_15998_length_481_cov_5.522059_g15202_i0 PRJNA715462 15998 481 5.522059 26.56110379 Fimicolochytrium jonesii 1396493 Fungi Fungi 128 7.57e-25   NTclustered gi|2432097581|ref|XM_053071233.1| 1396493 g15202 i0 82.313 4.05405405405405 147 26 31 0 282 428 229 83 Fimicolochytrium jonesii 30S ribosomal protein S30e (EV422DRAFT_541825), mRNA blastn 1950 128 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Spizellomycetales Powellomycetaceae Fimicolochytrium Fimicolochytrium jonesii
23658262 23658262 PRJNA715462_P_NODE_11919_length_593_cov_1.840385_g11133_i0 PRJNA715462 11919 593 1.840385 10.91348305 Polychytrium aggregatum 110093 Fungi Fungi 436 1.3900000000000002e-117   NTclustered gi|2432130198|ref|XM_053115874.1| 110093 g11133 i0 80.311 98.079258010118 579 112 97 2 5 582 625 1202 Polychytrium aggregatum P-loop containing nucleoside triphosphate hydrolase protein (BJ171DRAFT_7386), mRNA blastn 58161 436 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
24932293 24932293 PRJNA715462_P_NODE_30960_length_320_cov_1.246964_g30164_i0 PRJNA715462 30960 320 1.246964 3.9902848 Polychytrium aggregatum 110093 Fungi Fungi 239 2.15e-58   NTclustered gi|2432171462|ref|XM_053112561.1| 110093 g30164 i0 81.356 85.5125 295 53 92 2 13 306 1600 1307 Polychytrium aggregatum heat shock protein 90 kDa (BJ171DRAFT_524257), mRNA blastn 27364 239 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;