RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA715462" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA715462 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2467615 2467615 PRJNA715462_P_NODE_39282_length_283_cov_1.461905_g38486_i0 PRJNA715462 39282 283 1.461905 4.13719115 Marseillevirus 1513458 Viruses Viruses 56.5 0.002   NTclustered gi|1143708043|gb|KX066233.1| 1955558 g38486 i0 83.607 1.68197879858657 61 9 22 1 57 117 77933 77992 Noumeavirus isolate NMV1, complete genome blastn 476 56.5 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Pimascovirales Marseilleviridae Marseillevirus Noumeavirus
7570121 7570121 PRJNA715462_P_NODE_38546_length_285_cov_1.452830_g37750_i0 PRJNA715462 38546 285 1.45283 4.1405655 root 1 Root_unresolved Root_unresolved 527 3.59e-145   NTclustered gi|2079660852|emb|OU501478.1| 10515 g37750 i0 100 100 285 0 100 0 1 285 17625 17909 Human adenovirus 2 isolate ADVJA-00-BE genome assembly, chromosome: ADVJA-00-BE blastn 28500 527 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
17283489 17283489 PRJNA715462_P_NODE_18614_length_434_cov_2.443213_g17818_i0 PRJNA715462 18614 434 2.443213 10.60354442 Chrysochromulina parva virophage Moe 2420055 Viruses Viruses 58.4 0.001   NTclustered gi|1509794417|gb|MH919297.1| 2420055 g17818 i0 94.595 0.0852534562211982 37 2 9 0 210 246 15205 15241 Chrysochromulina parva virophage Moe, complete genome blastn 37 58.4 1 Viruses   Bamfordvirae Preplasmiviricota Virophaviricetes Priklausovirales Lavidaviridae   Chrysochromulina parva virophage Moe

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;