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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA715462" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 14 ✖

bioproject 1

  • PRJNA715462 · 14 ✖

analysis 1

  • blastn · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1982376 1982376 PRJNA715462_P_NODE_63562_length_244_cov_0.900585_g62766_i0 PRJNA715462 63562 244 0.900585 2.1974274 Auxenochlorella protothecoides 3075 Plants Plants 56.5 0.002   NTclustered gi|760446266|ref|XM_011401900.1| 3075 g62766 i0 96.97 0.135245901639344 33 1 14 0 117 149 955 923 Auxenochlorella protothecoides Nicotinamide mononucleotide adenylyltransferase 1 partial mRNA blastn 33 56.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
3256849 3256849 PRJNA715462_P_NODE_21243_length_399_cov_1.180982_g20447_i0 PRJNA715462 21243 399 1.180982 4.71211818 Chlamydomonas reinhardtii 3055 Plants Plants 58.4 8.22e-4   NTclustered gi|2082256647|ref|XM_043066703.1| 3055 g20447 i0 94.595 0.709273182957393 37 2 9 0 219 255 448 412 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_10g434967v5), mRNA blastn 283 58.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
3256892 3256892 PRJNA715462_P_NODE_23323_length_376_cov_1.402640_g22527_i0 PRJNA715462 23323 376 1.40264 5.2739264 Ignatius tetrasporus 231078 Plants Plants 139 2.67e-28   NTclustered gi|371782089|emb|HE610121.1| 231078 g22527 i0 89.381 28.5478723404255 113 8 30 4 1 111 3188 3078 Ignatius tetrasporus 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, strain UTEX 2012 blastn 10734 139 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ignatiales Ignatiaceae Ignatius Ignatius tetrasporus
4534216 4534216 PRJNA715462_P_NODE_35864_length_294_cov_1.995475_g35068_i0 PRJNA715462 35864 294 1.995475 5.8666965 Medakamo hakoo 3113649 Plants Plants 224 5.459999999999999e-54   NTclustered gi|2083529837|dbj|LC604817.1| 3113649 g35068 i0 80.612 38.5476190476191 294 53 99 4 1 292 5213 4922 Medakamo hakoo NIES-4000 mitochondrial DNA, complete genome blastn 11333 224 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Medakamo Medakamo hakoo
14734974 14734974 PRJNA715462_P_NODE_42812_length_272_cov_1.839196_g42016_i0 PRJNA715462 42812 272 1.839196 5.00261312 Prototheca bovis 2509265 Plants Plants 104 6.79e-18   NTclustered gi|1159431146|gb|KX389286.1| 2509265 g42016 i0 83.784 21.1617647058824 111 17 41 1 63 173 168 59 Prototheca bovis isolate SAG-2021 alpha tubulin (TUA1) mRNA, complete cds blastn 5756 104 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca bovis
14735209 14735209 PRJNA715462_P_NODE_55012_length_249_cov_0.875000_g54216_i0 PRJNA715462 55012 249 0.875 2.17875 Volvox carteri 3067 Plants Plants 52.8 0.023   NTclustered gi|302847324|ref|XM_002955151.1| 3068 g54216 i0 94.286 0.140562248995984 35 1 14 1 100 133 3315 3349 Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_96120), partial mRNA blastn 35 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
16008630 16008630 PRJNA715462_P_NODE_45473_length_265_cov_0.906250_g44677_i0 PRJNA715462 45473 265 0.90625 2.4015625 Chlamydomonas reinhardtii 3055 Plants Plants 250 8e-62   NTclustered gi|2082260397|ref|XM_043068042.1| 3055 g44677 i0 83.969 24.6075471698113 262 40 98 2 5 265 241 501 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_12g498600v5), mRNA blastn 6521 250 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
17284256 17284256 PRJNA715462_P_NODE_52854_length_250_cov_0.870056_g52058_i0 PRJNA715462 52854 250 0.870056 2.17514 Polytomella parva 51329 Plants Plants 230 9.75e-56   NTclustered gi|1861356433|gb|MT377444.1| 51329 g52058 i0 83.2 92.892 250 42 100 0 1 250 492 741 Polytomella parva clone 0016312155 luminal-binding protein (BIP1) mRNA, complete cds; plastid blastn 23223 230 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Polytomella Polytomella parva
17284522 17284522 PRJNA715462_P_NODE_67894_length_241_cov_3.648810_g67098_i0 PRJNA715462 67894 241 3.64881 8.7936321 Chlamydomonas reinhardtii 3055 Plants Plants 191 4.41e-44   NTclustered gi|2082253475|ref|XM_001695212.2| 3055 g67098 i0 83.902 4.37344398340249 205 28 85 5 38 241 961 761 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_09g386750v5), mRNA blastn 1054 191 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
19833004 19833004 PRJNA715462_P_NODE_46776_length_261_cov_1.255319_g45980_i0 PRJNA715462 46776 261 1.255319 3.27638259 Tetraselmis sp. CCMP 881 1812852 Plants Plants 91.6 5.04e-14   NTclustered gi|1778428824|gb|MN642087.1| 1812852 g45980 i0 93.443 24.6973180076628 61 4 23 0 72 132 39708 39768 Tetraselmis sp. CCMP 881 mitochondrion, complete genome blastn 6446 91.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorodendrophyceae Chlorodendrales Chlorodendraceae Tetraselmis Tetraselmis sp. CCMP 881
22383089 22383089 PRJNA715462_P_NODE_22958_length_380_cov_0.980456_g22162_i0 PRJNA715462 22958 380 0.980456 3.7257328 Chlamydomonas reinhardtii 3055 Plants Plants 117 1.27e-21   NTclustered gi|2082253493|ref|XM_043066154.1| 3055 g22162 i0 86.667 1.18684210526316 105 14 28 0 206 310 756 652 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_09g405106v5), mRNA blastn 451 117 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
22869782 22869782 PRJNA715462_P_NODE_60558_length_246_cov_0.890173_g59762_i0 PRJNA715462 60558 246 0.890173 2.18982558 Chlorophyta 3041 Plants Plants 230 9.56e-56   NTclustered gi|926790540|ref|XM_014048290.1| 145388 g59762 i0 84.783 81.7276422764228 230 33 93 2 16 244 635 863 Monoraphidium neglectum aurora kinase A mRNA blastn 20105 231 0.995670995670996 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
23658918 23658918 PRJNA715462_P_NODE_37279_length_289_cov_1.324074_g36483_i0 PRJNA715462 37279 289 1.324074 3.82657386 Chlorella variabilis 554065 Plants Plants 143 1.54e-29   NTclustered gi|552822108|ref|XM_005845964.1| 554065 g36483 i0 81.111 6.18339100346021 180 32 62 2 2 180 259 437 Chlorella variabilis hypothetical protein (CHLNCDRAFT_53431) mRNA, complete cds blastn 1787 143 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
24932624 24932624 PRJNA715462_P_NODE_46240_length_262_cov_1.883598_g45444_i0 PRJNA715462 46240 262 1.883598 4.93502676 Chlamydomonas reinhardtii 3055 Plants Plants 63.9 1.1e-5   NTclustered gi|2082238366|ref|XM_043059241.1| 3055 g45444 i0 91.304 0.282442748091603 46 4 18 0 20 65 1511 1556 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_02g081250v5), mRNA blastn 74 63.9 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;