RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA715462" and tax_clade = "Metamonada"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Metamonada · 3 ✖

bioproject 1

  • PRJNA715462 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1982476 1982476 PRJNA715462_P_NODE_6962_length_874_cov_2.342072_g6273_i0 PRJNA715462 6962 874 2.342072 20.46970928 Ergobibamus cyprinoides 926446 Fornicata other_Eukaryota 597 9.029999999999997e-166   NTclustered gi|339759377|dbj|AB600301.1| 926446 g6273 i0 81.152 85.9496567505721 764 127 86 14 118 872 1279 524 Ergobibamus cyprinoides gene for beta-tubulin, partial cds, strain: CL blastn 75120 597 1 Eukaryota Metamonada   Fornicata       Ergobibamus Ergobibamus cyprinoides
16009065 16009065 PRJNA715462_P_NODE_68953_length_241_cov_0.916667_g68157_i0 PRJNA715462 68953 241 0.916667 2.20916747 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 58.4 4.66e-4   NTclustered gi|2794943781|ref|XM_067872118.1| 2049356 g68157 i0 100 10.7219917012448 31 0 13 0 3 33 1764 1794 Monocercomonoides exilis putative NEK protein kinase (MONOS_2210), partial mRNA blastn 2584 58.4 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
21108301 21108301 PRJNA715462_P_NODE_35777_length_295_cov_1.040541_g34981_i0 PRJNA715462 35777 295 1.040541 3.06959595 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 62.1 4.55e-5   NTclustered gi|2794976514|ref|XM_067879683.1| 2049356 g34981 i0 94.872 10.7118644067797 39 2 13 0 24 62 1072 1034 Monocercomonoides exilis putative DDRGK domain-containing protein 1 (MONOS_9206), mRNA blastn 3160 62.1 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;