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contig_metadata

32 rows where analysis = "blastn", bioproject = "PRJNA715462" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 32 ✖

bioproject 1

  • PRJNA715462 · 32 ✖

analysis 1

  • blastn · 32 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
705409 705409 PRJNA715462_P_NODE_1781_length_1992_cov_37.344971_g1479_i0 PRJNA715462 1781 1992 37.344971 743.91182232 Ripella sp. 805 1217113 Discosea other_Eukaryota 2499 0   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g1479 i0 93.72 85.0567269076305 1688 72 84 22 311 1992 1 1660 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 169433 2499 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
706314 706314 PRJNA715462_P_NODE_58881_length_247_cov_0.885057_g58085_i0 PRJNA715462 58881 247 0.885057 2.18609079 Acytostelium subglobosum 361139 Evosea other_Eukaryota 209 1.25e-49   NTclustered gi|831754130|ref|XM_012892568.1| 1410327 g58085 i0 84.507 50.080971659919 213 31 86 2 11 222 288 77 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 12370 209 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
1981490 1981490 PRJNA715462_P_NODE_20662_length_406_cov_1.384384_g19866_i0 PRJNA715462 20662 406 1.384384 5.62059904 Cavenderia fasciculata 261658 Evosea other_Eukaryota 58.4 8.37e-4   NTclustered gi|470236295|ref|XM_004350051.1| 261658 g19866 i0 89.583 0.118226600985222 48 1 11 3 196 240 66 20 Cavenderia fasciculata uncharacterized protein (DFA_11158), partial mRNA blastn 48 58.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
5020553 5020553 PRJNA715462_P_NODE_44244_length_268_cov_1.574359_g43448_i0 PRJNA715462 44244 268 1.574359 4.21928212 Vermamoeba 1260114 Tubulinea other_Eukaryota 496 9.429999999999999e-136   NTclustered gi|300078496|gb|GU001158.1| 5778 g43448 i0 100 55.6977611940299 268 0 100 0 1 268 2896 2629 Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 14927 496 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
5809242 5809242 PRJNA715462_P_NODE_24245_length_367_cov_2.836735_g23449_i0 PRJNA715462 24245 367 2.836735 10.41081745 Acytostelium subglobosum 361139 Evosea other_Eukaryota 296 1.46e-75   NTclustered gi|831769224|ref|XM_012897186.1| 1410327 g23449 i0 81.921 9.50408719346049 354 60 96 4 16 367 294 645 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 3488 296 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
5809894 5809894 PRJNA715462_P_NODE_55785_length_248_cov_0.880000_g54989_i0 PRJNA715462 55785 248 0.88 2.1824 Acytostelium subglobosum 361139 Evosea other_Eukaryota 52.8 0.022   NTclustered gi|831753239|ref|XM_012892301.1| 1410327 g54989 i0 100 0.112903225806452 28 0 11 0 41 68 1303 1330 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
7084900 7084900 PRJNA715462_P_NODE_53886_length_249_cov_1.312500_g53090_i0 PRJNA715462 53886 249 1.3125 3.268125 Acytostelium subglobosum 361139 Evosea other_Eukaryota 141 4.68e-29   NTclustered gi|831789395|ref|XM_012903591.1| 1410327 g53090 i0 77.5 3.20481927710843 240 51 96 3 11 249 1305 1542 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 798 141 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
8359120 8359120 PRJNA715462_P_NODE_3347_length_1430_cov_2.795873_g2903_i0 PRJNA715462 3347 1430 2.795873 39.9809839 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 730 0   NTclustered gi|470447963|ref|XM_004340066.1| 1257118 g2903 i0 84.148 48.179020979021 757 116 53 4 661 1415 1598 844 Acanthamoeba castellanii str. Neff ATP synthase, putative (ACA1_367940), partial mRNA blastn 68896 730 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8359293 8359293 PRJNA715462_P_NODE_42267_length_274_cov_1.338308_g41471_i0 PRJNA715462 42267 274 1.338308 3.66696392 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 156 1.86e-33   NTclustered gi|470529677|ref|XM_004368054.1| 1257118 g41471 i0 81.218 6.45620437956204 197 33 71 4 22 216 2667 2473 Acanthamoeba castellanii str. Neff RNA recognition motifdomain containing protein (ACA1_291640), partial mRNA blastn 1769 156 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
8359906 8359906 PRJNA715462_P_NODE_9367_length_706_cov_21.812006_g8610_i0 PRJNA715462 9367 706 21.812006 153.99276236 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 374 1.33e-98   NTclustered gi|470441552|ref|XM_004339378.1| 1257118 g8610 i0 79.235 65.6898016997167 549 104 77 8 17 560 1 544 Acanthamoeba castellanii str. Neff ribosomal protein L10, putative (ACA1_061530), partial mRNA blastn 46377 374 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9634435 9634435 PRJNA715462_P_NODE_39028_length_284_cov_1.189573_g38232_i0 PRJNA715462 39028 284 1.189573 3.37838732 Acytostelium subglobosum 361139 Evosea other_Eukaryota 60.2 1.57e-4   NTclustered gi|831760749|ref|XM_012894595.1| 1410327 g38232 i0 97.143 1.00352112676056 35 1 12 0 180 214 1011 1045 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 285 60.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
9634444 9634444 PRJNA715462_P_NODE_39268_length_283_cov_1.466667_g38472_i0 PRJNA715462 39268 283 1.466667 4.15066761 Acytostelium subglobosum 361139 Evosea other_Eukaryota 95.3 4.28e-15   NTclustered gi|831761070|ref|XM_012894692.1| 1410327 g38472 i0 87.654 3.23321554770318 81 10 29 0 26 106 399 319 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 915 95.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
9634790 9634790 PRJNA715462_P_NODE_57588_length_247_cov_1.132184_g56792_i0 PRJNA715462 57588 247 1.132184 2.79649448 Platyamoeba placida 3454475 Discosea other_Eukaryota 337 5.5e-88   NTclustered gi|33946348|gb|AY294153.1| 197527 g56792 i0 91.736 98.6720647773279 242 20 98 0 1 242 839 1080 Platyamoeba placida actin mRNA, partial cds blastn 24372 337 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba placida
10910287 10910287 PRJNA715462_P_NODE_55149_length_249_cov_0.875000_g54353_i0 PRJNA715462 55149 249 0.875 2.17875 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 424 4.15e-114   NTclustered gi|421976355|gb|JQ519494.1| 5778 g54353 i0 97.571 24.1526104417671 247 6 99 0 3 249 292 46 Vermamoeba vermiformis clone JG10.150_g4 elongation factor 2 alpha gene, partial cds blastn 6014 424 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
10910624 10910624 PRJNA715462_P_NODE_9089_length_723_cov_3.129231_g8334_i0 PRJNA715462 9089 723 3.129231 22.62434013 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 431 7.949999999999998e-116   NTclustered gi|470525569|ref|XM_004356569.1| 1257118 g8334 i0 79.129 5.11065006915629 666 107 89 17 5 645 286 944 Acanthamoeba castellanii str. Neff mitochondrial phosphate transporter, putative (ACA1_173800), partial mRNA blastn 3695 431 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
11395820 11395820 PRJNA715462_P_NODE_27309_length_343_cov_2.766667_g26513_i0 PRJNA715462 27309 343 2.766667 9.48966781 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 56.5 0.003   NTclustered gi|167381181|ref|XM_001735557.1| 370354 g26513 i0 96.97 2.97084548104956 33 1 10 0 133 165 245 277 Entamoeba dispar SAW760 uncharacterized protein (EDI_096510), partial mRNA blastn 1019 56.5 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba dispar
13458964 13458964 PRJNA715462_P_NODE_13331_length_547_cov_4.770042_g12538_i0 PRJNA715462 13331 547 4.770042 26.09212974 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 261 8.21e-65   NTclustered gi|470529917|ref|XM_004368096.1| 1257118 g12538 i0 81.646 57.1224862888483 316 57 58 1 106 420 422 107 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_292890), partial mRNA blastn 31246 261 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13459094 13459094 PRJNA715462_P_NODE_17271_length_457_cov_1.375000_g16475_i0 PRJNA715462 17271 457 1.375 6.28375 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 303 1.11e-77   NTclustered gi|88601113|gb|DQ390343.1| 5755 g16475 i0 82.799 1.77680525164114 343 55 75 3 13 353 645 305 Acanthamoeba castellanii sterol C-24 reductase-like protein mRNA, partial cds blastn 812 303 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
13459970 13459970 PRJNA715462_P_NODE_55951_length_248_cov_0.880000_g55155_i0 PRJNA715462 55951 248 0.88 2.1824 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 459 1.13e-124   NTclustered gi|292559443|ref|NC_013986.1| 5778 g55155 i0 100 1 248 0 100 0 1 248 25990 25743 Hartmannella vermiformis mitochondrion, complete genome blastn 248 459 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
14734712 14734712 PRJNA715462_P_NODE_3032_length_1510_cov_8.370216_g2609_i0 PRJNA715462 3032 1510 8.370216 126.3902616 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 966 0   NTclustered gi|470484553|ref|XM_004344028.1| 1257118 g2609 i0 80.045 54.3026490066225 1328 245 87 17 60 1377 1413 96 Acanthamoeba castellanii str. Neff Sadenosyl-L-homocysteine hydrolase, putative (ACA1_054200), partial mRNA blastn 81997 966 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
14734775 14734775 PRJNA715462_P_NODE_33432_length_306_cov_1.935622_g32636_i0 PRJNA715462 33432 306 1.935622 5.92300332 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 56.5 0.002   NTclustered gi|470378920|ref|XM_004333477.1| 1257118 g32636 i0 94.444 0.117647058823529 36 2 12 0 205 240 43 78 Acanthamoeba castellanii str. Neff Actobindin, putative (ACA1_256510), partial mRNA blastn 36 56.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
16007821 16007821 PRJNA715462_P_NODE_12693_length_567_cov_18.898785_g11903_i0 PRJNA715462 12693 567 18.898785 107.15611095 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 237 1.4399999999999998e-57   NTclustered gi|470529917|ref|XM_004368096.1| 1257118 g11903 i0 80.795 53.1534391534392 302 58 53 0 126 427 422 121 Acanthamoeba castellanii str. Neff ribosomal protein S17, putative (ACA1_292890), partial mRNA blastn 30138 237 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
16008268 16008268 PRJNA715462_P_NODE_28953_length_332_cov_1.729730_g28157_i0 PRJNA715462 28953 332 1.72973 5.7427036 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 569 6.979999999999998e-158   NTclustered gi|300078496|gb|GU001158.1| 5778 g28157 i0 97.59 5.66265060240964 332 8 100 0 1 332 1284 1615 Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 1880 569 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
16008783 16008783 PRJNA715462_P_NODE_52373_length_250_cov_0.870056_g51577_i0 PRJNA715462 52373 250 0.870056 2.17514 Dictyostelium purpureum 5786 Evosea other_Eukaryota 54.7 0.006   NTclustered gi|330845851|ref|XM_003294733.1| 5786 g51577 i0 96.875 1.152 32 1 13 0 163 194 424 393 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_159839), partial mRNA blastn 288 54.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
16008835 16008835 PRJNA715462_P_NODE_55513_length_248_cov_1.662857_g54717_i0 PRJNA715462 55513 248 1.662857 4.12388536 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 106 1.7e-18   NTclustered gi|470517203|ref|XM_004353125.1| 1257118 g54717 i0 90.244 4.43145161290323 82 7 33 1 105 186 1417 1337 Acanthamoeba castellanii str. Neff alanineglyoxylate aminotransferase (ACA1_072820), partial mRNA blastn 1099 106 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
17283930 17283930 PRJNA715462_P_NODE_37314_length_289_cov_1.250000_g36518_i0 PRJNA715462 37314 289 1.25 3.6125 uncultured Amoebozoa 590481 Root_unresolved Root_unresolved 514 2.84e-141   NTclustered gi|221185864|gb|FJ577811.1| 590481 g36518 i0 98.958 17.2698961937716 288 1 99 2 2 289 880 595 Uncultured Amoebozoa clone Ivry07 18S ribosomal RNA gene, partial sequence blastn 4991 514 1 Eukaryota Amoebozoa             uncultured Amoebozoa
17284532 17284532 PRJNA715462_P_NODE_68434_length_241_cov_0.916667_g67638_i0 PRJNA715462 68434 241 0.916667 2.20916747 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 211 3.38e-50   NTclustered gi|909719645|gb|KT185625.1| 5778 g67638 i0 90.625 0.663900414937759 160 14 66 1 83 241 894 735 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 160 211 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
18557301 18557301 PRJNA715462_P_NODE_19915_length_416_cov_1.011662_g19119_i0 PRJNA715462 19915 416 1.011662 4.20851392 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 207 8.07e-49   NTclustered gi|470434799|ref|XM_004338670.1| 1257118 g19119 i0 78.144 4.06971153846154 334 67 80 5 65 395 61 391 Acanthamoeba castellanii str. Neff Tcomplex protein 1, theta subunit (ACA1_090030), partial mRNA blastn 1693 207 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
18557548 18557548 PRJNA715462_P_NODE_29575_length_328_cov_1.811765_g28779_i0 PRJNA715462 29575 328 1.811765 5.9425892 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 156 2.29e-33   NTclustered gi|470521480|ref|XM_004353671.1| 1257118 g28779 i0 79.63 7.98780487804878 216 44 66 0 113 328 348 133 Acanthamoeba castellanii str. Neff 60S ribosomal protein L27a, putative (ACA1_376690), partial mRNA blastn 2620 156 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
21108289 21108289 PRJNA715462_P_NODE_35097_length_298_cov_1.368889_g34301_i0 PRJNA715462 35097 298 1.368889 4.07928922 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 542 1.35e-149   NTclustered gi|909719645|gb|KT185625.1| 5778 g34301 i0 99.662 42.496644295302 296 1 99 0 1 296 6716 7011 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 12664 542 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
24932871 24932871 PRJNA715462_P_NODE_58840_length_247_cov_0.885057_g58044_i0 PRJNA715462 58840 247 0.885057 2.18609079 Thecamoeba similis 242545 Discosea other_Eukaryota 230 9.61e-56   NTclustered gi|33946350|gb|AY294154.1| 242545 g58044 i0 86.256 81.2672064777328 211 29 85 0 1 211 251 41 Thecamoeba similis actin mRNA, complete cds blastn 20073 230 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecamoeba Thecamoeba similis
24933101 24933101 PRJNA715462_P_NODE_7600_length_822_cov_4.056075_g6890_i0 PRJNA715462 7600 822 4.056075 33.3409365 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 473 1.4899999999999999e-128   NTclustered gi|470439766|ref|XM_004339180.1| 1257118 g6890 i0 79.539 9.09002433090024 694 118 83 17 1 679 863 1547 Acanthamoeba castellanii str. Neff Inositol3-phosphate synthase (ACA1_058810), partial mRNA blastn 7472 473 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;