RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA715461" and tax_kingdom = "Pararnavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Pararnavirae · 5 ✖

bioproject 1

  • PRJNA715461 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11395793 11395793 PRJNA715461_S_NODE_49_length_994_cov_33.335505_g26_i1 PRJNA715461 49 994 33.335505 331.3549197 Gammaretrovirus 153135 Viruses Viruses 1522 0   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g26 i1 98.494 82.887323943662 863 13 87 0 129 991 4612 3750 Moloney murine leukemia virus, complete genome blastn 82390 1522 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
16495113 16495113 PRJNA715461_S_NODE_113_length_792_cov_116.655076_g26_i2 PRJNA715461 113 792 116.655076 923.90820192 Gammaretrovirus 153135 Viruses Viruses 1225 0   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g26 i2 98.696 84.8497474747475 690 9 87 0 4 693 3750 4439 Moloney murine leukemia virus, complete genome blastn 67201 1225 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
21594443 21594443 PRJNA715461_S_NODE_17_length_1312_cov_4028.604520_g8_i0 PRJNA715461 17 1312 4028.60452 52855.2913024 root 1 Root_unresolved Root_unresolved 1965 0   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g8 i0 97.4 87.9565548780488 1154 30 88 0 80 1233 3749 2596 Moloney murine leukemia virus, complete genome blastn 115399 1965 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
24143810 24143810 PRJNA715461_S_NODE_119_length_759_cov_7206.064140_g26_i3 PRJNA715461 119 759 7206.06414 54694.0268226 Gammaretrovirus 153135 Viruses Viruses 1203 0   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g26 i3 98.121 87.4361001317523 692 10 91 2 68 756 4441 3750 Moloney murine leukemia virus, complete genome blastn 66364 1203 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
25418738 25418738 PRJNA715461_S_NODE_40_length_1046_cov_169.130524_g26_i0 PRJNA715461 40 1046 169.130524 1769.10528104 Gammaretrovirus 153135 Viruses Viruses 1522 0   NTclustered gi|331934|gb|J02255.1|MLMCG 11786 g26 i0 98.494 78.7667304015296 863 13 83 0 181 1043 4612 3750 Moloney murine leukemia virus, complete genome blastn 82390 1522 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;