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contig_metadata

27 rows where analysis = "blastn", bioproject = "PRJNA715461" and tax_kingdom = "Fungi"

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tax_superkingdom 1

tax_kingdom 1

  • Fungi · 27 ✖

tax_clade 1

bioproject 1

  • PRJNA715461 · 27 ✖

analysis 1

  • blastn · 27 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1192199 1192199 PRJNA715461_S_NODE_1261_length_225_cov_25.309211_g1187_i0 PRJNA715461 1261 225 25.309211 56.94572475 Eukaryota 2759 Fungi Fungi 296 8.37e-76   NTclustered gi|2558627581|gb|OR405830.1| 76775 g1187 i0 100 72.5333333333333 160 0 71 0 21 180 338 497 Malassezia restricta strain GSVCC20Z3-2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 16320 296 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
1192200 1192200 PRJNA715461_S_NODE_1301_length_222_cov_12644.416107_g1227_i0 PRJNA715461 1301 222 12644.416107 28070.60375754 Blumeria 34372 Fungi Fungi 267 6.46e-67   NTclustered gi|1859735560|gb|MT644878.1| 34373 g1227 i0 100 64.8603603603604 144 0 65 0 79 222 649 506 Blumeria graminis isolate DM1150 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 14399 267 1 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Erysiphales Erysiphaceae Blumeria Blumeria graminis
1981139 1981139 PRJNA715461_S_NODE_202_length_599_cov_9033.634981_g151_i0 PRJNA715461 202 599 9033.634981 54111.47353619 uncultured fungus 175245 Fungi Fungi 673 0   NTclustered gi|38154526|gb|AY364863.1| 175245 g151 i0 91.296 62.1652754590985 494 41 82 2 103 596 1623 1132 Uncultured fungus 28S ribosomal RNA gene, partial sequence blastn 37237 673 1 Eukaryota Opisthokonta Fungi           uncultured fungus
2467565 2467565 PRJNA715461_S_NODE_322_length_485_cov_5731.412621_g255_i0 PRJNA715461 322 485 5731.412621 27797.35121185 Eukaryota 2759 Fungi Fungi 675 0   NTclustered gi|583831991|gb|KF565554.1| 175245 g255 i0 98.939 79.4824742268041 377 4 78 0 28 404 1 377 Uncultured soil fungus clone NCD_LSU_otu584 28S ribosomal RNA gene, partial sequence blastn 38549 676 0.998520710059172 Eukaryota Opisthokonta Fungi           uncultured fungus
3256497 3256497 PRJNA715461_S_NODE_1083_length_241_cov_2.464286_g1009_i0 PRJNA715461 1083 241 2.464286 5.93892926 uncultured fungus 175245 Fungi Fungi 342 1.1499999999999999e-89   NTclustered gi|480554473|gb|KC558040.1| 175245 g1009 i0 99.468 4.66804979253112 188 1 78 0 4 191 383 570 Uncultured fungus clone NTS_28S_047E_2_a1 28S ribosomal RNA gene, partial sequence blastn 1125 342 1 Eukaryota Opisthokonta Fungi           uncultured fungus
4533482 4533482 PRJNA715461_S_NODE_444_length_410_cov_1.347181_g370_i0 PRJNA715461 444 410 1.347181 5.5234421 uncultured fungus 175245 Fungi Fungi 418 3.369999999999999e-112   NTclustered gi|2159202847|emb|OU941275.1| 175245 g370 i0 99.563 69.0463414634146 229 1 85 0 179 407 971 743 uncultured fungus genomic DNA sequence contains 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene, isolate consensus02570 blastn 28309 418 1 Eukaryota Opisthokonta Fungi           uncultured fungus
5020491 5020491 PRJNA715461_S_NODE_364_length_452_cov_6231.733509_g292_i0 PRJNA715461 364 452 6231.733509 28167.43546068 Eukaryota 2759 Fungi Fungi 616 1.2399999999999999e-171   NTclustered gi|583831991|gb|KF565554.1| 175245 g292 i0 98.841 79.0508849557522 345 4 76 0 28 372 1 345 Uncultured soil fungus clone NCD_LSU_otu584 28S ribosomal RNA gene, partial sequence blastn 35731 617 0.99837925445705 Eukaryota Opisthokonta Fungi           uncultured fungus
5020496 5020496 PRJNA715461_S_NODE_884_length_267_cov_1.149485_g810_i0 PRJNA715461 884 267 1.149485 3.06912495 Mucor 4830 Fungi Fungi 211 3.81e-50   NTclustered gi|168378|gb|M26190.1|MRARRHA 4841 g810 i0 86.458 63.4119850187266 192 26 72 0 21 212 2032 2223 M.racemosus (Zygomycetes) 25S ribosomal RNA gene blastn 16931 211 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
5808779 5808779 PRJNA715461_S_NODE_405_length_429_cov_6585.294944_g331_i0 PRJNA715461 405 429 6585.294944 28250.91530976 Phialophora verrucosa 39412 Fungi Fungi 340 7.89e-89   NTclustered gi|336088197|dbj|AB550776.1| 39412 g331 i0 86.154 72.0745920745921 325 34 75 9 106 425 4293 3975 Phialophora verrucosa genes for ITS1, 5.8S rRNA, ITS2 and large subunit rRNA, partial and complete sequence, strain: IFM 5089 blastn 30920 340 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Chaetothyriales Herpotrichiellaceae Phialophora Phialophora verrucosa
7083792 7083792 PRJNA715461_S_NODE_1326_length_221_cov_5.918919_g1252_i0 PRJNA715461 1326 221 5.918919 13.08081099 uncultured fungus 175245 Fungi Fungi 130 8.8e-26   NTclustered gi|2159202186|emb|OU940393.1| 175245 g1252 i0 83.453 52.7782805429864 139 23 63 0 4 142 289 427 uncultured fungus genomic DNA sequence contains 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene, isolate consensus01687 blastn 11664 130 1 Eukaryota Opisthokonta Fungi           uncultured fungus
10120769 10120769 PRJNA715461_S_NODE_1528_length_211_cov_4.246377_g1454_i0 PRJNA715461 1528 211 4.246377 8.95985547 Eurotiomycetes 147545 Fungi Fungi 285 1.68e-72   NTclustered gi|1002923410|gb|KU561781.1| 5501 g1454 i0 91.429 98.9241706161137 210 14 99 4 1 208 215 8 Coccidioides immitis strain B11019 28S ribosomal RNA gene, partial sequence blastn 20873 285 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Onygenales Onygenaceae Coccidioides Coccidioides immitis
11395786 11395786 PRJNA715461_S_NODE_1149_length_233_cov_2.143750_g1075_i0 PRJNA715461 1149 233 2.14375 4.9949375 Agaricomycetes 155619 Fungi Fungi 158 4.3e-34   NTclustered gi|77379307|gb|DQ208412.1| 5315 g1075 i0 80 138.218884120172 225 35 94 10 16 233 1483 1262 Ganoderma lucidum strain C-1 large subunit ribosomal RNA gene, partial sequence blastn 32205 159 0.993710691823899 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Polyporaceae Ganoderma Ganoderma lucidum
11395792 11395792 PRJNA715461_S_NODE_1969_length_197_cov_10.072581_g1895_i0 PRJNA715461 1969 197 10.072581 19.84298457 Yarrowia 4951 Fungi Fungi 291 3.32e-74   NTclustered gi|2497522110|gb|OQ878644.1| 444778 g1895 i0 100 78.989847715736 157 0 80 0 38 194 203 47 Yarrowia phangngaensis isolate T378 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 15561 291 1 Eukaryota Opisthokonta Fungi Ascomycota Dipodascomycetes Dipodascales   Yarrowia Yarrowia phangngaensis
11395795 11395795 PRJNA715461_S_NODE_589_length_351_cov_17104.122302_g515_i0 PRJNA715461 589 351 17104.122302 60035.46928002 Fungi 4751 Fungi Fungi 169 3.16e-37   NTclustered gi|1378896647|gb|MF278562.1| 1485682 g515 i0 96.154 31.5982905982906 104 3 30 1 81 184 5639 5537 Mitosporidium daphniae strain UGP3 small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11091 169 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae
13946051 13946051 PRJNA715461_S_NODE_1111_length_238_cov_14625.254545_g1037_i0 PRJNA715461 1111 238 14625.254545 34808.1058171 Eukaryota 2759 Fungi Fungi 287 5.38e-73   NTclustered gi|406205|dbj|D12803.1|ERHSSRD3 5414 g1037 i0 95.082 66.6218487394958 183 8 77 1 56 238 1134 953 Erythrobasidium hasegawianum gene for small subunit ribosomal RNA blastn 15856 287 1 Eukaryota Opisthokonta Fungi Basidiomycota Cystobasidiomycetes Erythrobasidiales Erythrobasidiaceae Erythrobasidium Erythrobasidium hasegawianum
13946063 13946063 PRJNA715461_S_NODE_251_length_551_cov_7.945607_g195_i0 PRJNA715461 251 551 7.945607 43.78029457 Herpotrichiellaceae 43219 Fungi Fungi 917 0   NTclustered gi|4206352|gb|AF050276.1|AF050276 40355 g195 i0 96.898 99.0889292196007 548 15 99 2 1 548 1110 565 Fonsecaea pedrosoi 18S ribosomal RNA partial sequence, internal transcribed spacer 1, 5.8S ribosomal RNA, internal transcribed spacer 2 complete sequence and 28S ribosomal RNA partial sequence blastn 54598 922 0.994577006507592 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Chaetothyriales Herpotrichiellaceae Fonsecaea Fonsecaea pedrosoi
16007725 16007725 PRJNA715461_S_NODE_633_length_331_cov_2.019380_g559_i0 PRJNA715461 633 331 2.01938 6.6841478 Polyblastidium squamulosum 2294038 Fungi Fungi 130 1.4e-25   NTclustered gi|1476663660|gb|MG257770.1| 2294038 g559 i0 83.942 40.7945619335347 137 20 41 2 24 159 8303 8438 Heterodermia squamulosa voucher 48701 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 26S ribosomal RNA gene, complete sequence blastn 13503 130 1 Eukaryota Opisthokonta Fungi Ascomycota Lecanoromycetes Caliciales Physciaceae Polyblastidium Polyblastidium squamulosum
17769909 17769909 PRJNA715461_S_NODE_1134_length_235_cov_2.339506_g1060_i0 PRJNA715461 1134 235 2.339506 5.4978391 Blumeria 34372 Fungi Fungi 379 8.509999999999998e-101   NTclustered gi|153902086|dbj|AB273546.1| 34373 g1060 i0 99.519 82.6085106382979 208 1 89 0 4 211 548 755 Blumeria graminis genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, partial and complete sequence, isolate: MUMH1711 blastn 19413 379 1 Eukaryota Opisthokonta Fungi Ascomycota Leotiomycetes Erysiphales Erysiphaceae Blumeria Blumeria graminis
17769914 17769914 PRJNA715461_S_NODE_334_length_475_cov_128.037313_g267_i0 PRJNA715461 334 475 128.037313 608.17723675 Ascomycota 4890 Fungi Fungi 669 0   NTclustered gi|1840379205|gb|MT453271.1| 5599 g267 i0 99.726 76.8589473684211 365 1 77 0 107 471 915 551 Alternaria alternata isolate DSM100286_DF09_RLCS10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 36508 673 0.99405646359584 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Pleosporaceae Alternaria Alternaria alternata
19043978 19043978 PRJNA715461_S_NODE_1295_length_222_cov_31801.677852_g1221_i0 PRJNA715461 1295 222 31801.677852 70599.72483144 Sarocladiaceae 2502719 Fungi Fungi 267 6.46e-67   NTclustered gi|157366947|gb|EU119045.1| 175243 g1221 i0 100 64.8648648648649 144 0 65 0 79 222 197 54 Uncultured ascomycete clone Biofilm3-16 small subunit ribosomal RNA gene, partial sequence blastn 14400 267 1 Eukaryota Opisthokonta Fungi Ascomycota         uncultured Ascomycota
19043980 19043980 PRJNA715461_S_NODE_1735_length_205_cov_17.272727_g1661_i0 PRJNA715461 1735 205 17.272727 35.40909035 Ascomycota 4890 Fungi Fungi 374 3.3599999999999997e-99   NTclustered gi|148357034|dbj|AB304771.1| 444778 g1661 i0 100 99.2292682926829 202 0 99 0 1 202 257 56 Candida phangngensis gene for 26S rRNA, partial sequence, strain: TM2-16 blastn 20342 374 1 Eukaryota Opisthokonta Fungi Ascomycota Dipodascomycetes Dipodascales   Yarrowia Yarrowia phangngaensis
20318617 20318617 PRJNA715461_S_NODE_376_length_445_cov_6384.231183_g302_i0 PRJNA715461 376 445 6384.231183 28409.82876435 Eukaryota 2759 Fungi Fungi 601 3.4099999999999996e-167   NTclustered gi|583831991|gb|KF565554.1| 175245 g302 i0 98.813 78.8404494382022 337 4 76 0 28 364 1 337 Uncultured soil fungus clone NCD_LSU_otu584 28S ribosomal RNA gene, partial sequence blastn 35084 603 0.996683250414594 Eukaryota Opisthokonta Fungi           uncultured fungus
21107571 21107571 PRJNA715461_S_NODE_1737_length_205_cov_4.060606_g1663_i0 PRJNA715461 1737 205 4.060606 8.3242423 uncultured fungus 175245 Fungi Fungi 171 4.74e-38   NTclustered gi|2159201990|emb|OU940003.1| 175245 g1663 i0 95.327 60.009756097561 107 5 52 0 77 183 897 791 uncultured fungus genomic DNA sequence contains 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene, isolate consensus01298 blastn 12302 171 1 Eukaryota Opisthokonta Fungi           uncultured fungus
21594449 21594449 PRJNA715461_S_NODE_897_length_264_cov_1063.429319_g823_i0 PRJNA715461 897 264 1063.429319 2807.45340216 Basidiomycota 5204 Fungi Fungi 287 6.07e-73   NTclustered gi|207693271|gb|FJ196163.1| 29899 g823 i0 100 59.2916666666667 155 0 59 0 1 155 930 1084 Cystobasidium minutum strain DBSC-5 18S ribosomal RNA gene, partial sequence blastn 15653 287 1 Eukaryota Opisthokonta Fungi Basidiomycota Cystobasidiomycetes Cystobasidiales Cystobasidiaceae Cystobasidium Cystobasidium minutum
22382697 22382697 PRJNA715461_S_NODE_1678_length_207_cov_17.246269_g1604_i0 PRJNA715461 1678 207 17.246269 35.69977683 uncultured fungus 175245 Fungi Fungi 283 5.9e-72   NTclustered gi|2159201120|emb|OU938855.1| 175245 g1604 i0 99.359 75.3623188405797 156 1 75 0 48 203 325 170 uncultured fungus genomic DNA sequence contains 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2, 28S rRNA gene, isolate consensus00150 blastn 15600 283 1 Eukaryota Opisthokonta Fungi           uncultured fungus
22382709 22382709 PRJNA715461_S_NODE_998_length_249_cov_1.528409_g924_i0 PRJNA715461 998 249 1.528409 3.80573841 Capnodiales sp. 22MS03 1254183 Fungi Fungi 344 3.32e-90   NTclustered gi|411030840|gb|JX270306.1| 1254183 g924 i0 96.602 15.2128514056225 206 7 83 0 42 247 224 19 Capnodiales sp. 22MS03 28S-18S ribosomal RNA intergenic spacer, partial sequence blastn 3788 344 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Capnodiales     Capnodiales sp. 22MS03
25418742 25418742 PRJNA715461_S_NODE_640_length_329_cov_9483.503906_g566_i0 PRJNA715461 640 329 9483.503906 31200.72785074 Fungi 4751 Fungi Fungi 134 1.07e-26   NTclustered gi|1376792008|gb|MG372377.1| 47023 g566 i0 96.341 26.1641337386018 82 2 25 1 168 249 2880 2960 Orbilia vinosa voucher G.M. 2016-05-04-1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 8608 134 1 Eukaryota Opisthokonta Fungi Ascomycota Orbiliomycetes Orbiliales Orbiliaceae Orbilia Orbilia vinosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;