RNAquarium Metadata Server
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contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJNA715461" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 13 ✖

bioproject 1

  • PRJNA715461 · 13 ✖

analysis 1

  • blastn · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
705122 705122 PRJNA715461_S_NODE_401_length_432_cov_130.674095_g327_i0 PRJNA715461 401 432 130.674095 564.5120904 Procryptobia sp. 2060762 Euglenozoa other_Eukaryota 518 3.42e-142   NTclustered gi|1384591689|gb|MG679919.1| 2060762 g327 i0 97.377 72.4513888888889 305 7 70 1 126 429 1318 1014 Procryptobia sp. isolate HT261113 18S ribosomal RNA gene, partial sequence blastn 31299 518 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Parabodonida   Procryptobia Procryptobia sp.
3743924 3743924 PRJNA715461_S_NODE_443_length_410_cov_7.860534_g369_i0 PRJNA715461 443 410 7.860534 32.2281894 Trypanosoma 5690 Euglenozoa other_Eukaryota 399 1.2199999999999999e-106   NTclustered gi|2026667530|dbj|LC618030.1| 67003 g369 i0 85.472 124.056097560976 413 26 93 20 4 386 4413 4821 Trypanosoma theileri YMG-11 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, ITS5, partial and complete sequence blastn 50863 399 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
5020477 5020477 PRJNA715461_S_NODE_104_length_825_cov_193.957447_g66_i0 PRJNA715461 104 825 193.957447 1600.14893775 Procryptobia 266822 Euglenozoa other_Eukaryota 1170 0   NTclustered gi|11037210|gb|AF208888.1|AF208888 351715 g66 i0 96.25 80.4763636363636 720 16 87 11 4 717 370 1084 Bodo sorokini small subunit ribosomal RNA gene, complete sequence blastn 66393 1175 0.995744680851064 Eukaryota Discoba   Euglenozoa Kinetoplastea Parabodonida   Procryptobia Procryptobia sorokini
8358461 8358461 PRJNA715461_S_NODE_427_length_415_cov_647.643275_g353_i0 PRJNA715461 427 415 647.643275 2687.71959125 Procryptobia sp. 2060762 Euglenozoa other_Eukaryota 516 1.18e-141   NTclustered gi|1384591689|gb|MG679919.1| 2060762 g353 i0 97.368 75.1855421686747 304 7 73 1 4 306 1014 1317 Procryptobia sp. isolate HT261113 18S ribosomal RNA gene, partial sequence blastn 31202 516 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Parabodonida   Procryptobia Procryptobia sp.
10909221 10909221 PRJNA715461_S_NODE_429_length_414_cov_12.478006_g355_i0 PRJNA715461 429 414 12.478006 51.65894484 Bodo sp. ATCC 50149 155205 Euglenozoa other_Eukaryota 263 1.69e-65   NTclustered gi|20331091|gb|AY028449.1| 155205 g355 i0 93.785 44.8212560386473 177 7 42 4 4 178 2311 2485 Bodo sp. ATCC 50149 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 18556 263 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo sp. ATCC 50149
12184458 12184458 PRJNA715461_S_NODE_390_length_437_cov_6814.868132_g316_i0 PRJNA715461 390 437 6814.868132 29780.97373684 Trypanoplasma borreli 5710 Euglenozoa other_Eukaryota 538 2.659999999999999e-148   NTclustered gi|20331096|gb|AY028454.1| 5710 g316 i0 94.302 118.421052631579 351 20 80 0 82 432 1023 673 Trypanoplasma borreli 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 51750 538 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Parabodonida   Trypanoplasma Trypanoplasma borreli
13946066 13946066 PRJNA715461_S_NODE_411_length_426_cov_6.294618_g337_i0 PRJNA715461 411 426 6.294618 26.81507268 Naegleria 5761 Heterolobosea other_Eukaryota 652 0   NTclustered gi|165968557|gb|EU377597.1| 36333 g337 i0 100 82.8661971830986 353 0 83 0 71 423 548 196 Naegleria clarki strain CRIB43 18S ribosomal RNA gene, partial sequence blastn 35301 652 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria clarki
13946073 13946073 PRJNA715461_S_NODE_871_length_269_cov_16.372449_g797_i0 PRJNA715461 871 269 16.372449 44.04188781 Trypanosoma 5690 Euglenozoa other_Eukaryota 316 7.909999999999998e-82   NTclustered gi|46091659|dbj|AB175623.1| 169531 g797 i0 93.868 102.561338289963 212 10 78 3 4 212 5446 5657 Trypanosoma grosi genes for IGS, 18S rRNA, 5.8S rRNA, 28S rRNA and ITS1-7, isolate: HANTO blastn 27589 316 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma grosi
15220738 15220738 PRJNA715461_S_NODE_172_length_631_cov_9.163082_g123_i0 PRJNA715461 172 631 9.163082 57.81904742 Kinetoplastea 5653 Euglenozoa other_Eukaryota 1002 0   NTclustered gi|28076820|gb|AF530519.1| 212100 g123 i0 99.102 88.3882725832013 557 5 88 0 72 628 1967 1411 Uncultured bodonid clone AT1-3 18S ribosomal RNA gene, partial sequence blastn 55773 1007 0.995034756703079 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae   uncultured bodonid
16007721 16007721 PRJNA715461_S_NODE_213_length_590_cov_4711.497099_g162_i0 PRJNA715461 213 590 4711.497099 27797.8328841 Procryptobia sorokini 351715 Euglenozoa other_Eukaryota 761 0   NTclustered gi|225216797|gb|FJ176712.1| 351715 g162 i0 98.387 126.101694915254 434 6 74 1 84 517 433 1 Procryptobia sorokini HFCC16 28S ribosomal RNA gene, partial sequence blastn 74400 761 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Parabodonida   Procryptobia Procryptobia sorokini
17283209 17283209 PRJNA715461_S_NODE_494_length_387_cov_7548.414013_g420_i0 PRJNA715461 494 387 7548.414013 29212.36223031 Procryptobia sp. 2060762 Euglenozoa other_Eukaryota 516 1.09e-141   NTclustered gi|1384591689|gb|MG679919.1| 2060762 g420 i0 97.368 80.625322997416 304 7 78 1 4 306 1014 1317 Procryptobia sp. isolate HT261113 18S ribosomal RNA gene, partial sequence blastn 31202 516 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Parabodonida   Procryptobia Procryptobia sp.
21107574 21107574 PRJNA715461_S_NODE_477_length_393_cov_7302.209375_g403_i0 PRJNA715461 477 393 7302.209375 28697.68284375 Procryptobia sp. 2060762 Euglenozoa other_Eukaryota 529 1.4199999999999994e-145   NTclustered gi|1384591689|gb|MG679919.1| 2060762 g403 i0 97.134 81.8625954198473 314 8 80 1 78 390 1327 1014 Procryptobia sp. isolate HT261113 18S ribosomal RNA gene, partial sequence blastn 32172 529 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Parabodonida   Procryptobia Procryptobia sp.
23658186 23658186 PRJNA715461_S_NODE_139_length_704_cov_4.586371_g95_i0 PRJNA715461 139 704 4.586371 32.28805184 Procryptobia sorokini 351715 Euglenozoa other_Eukaryota 1205 0   NTclustered gi|225216797|gb|FJ176712.1| 351715 g95 i0 97.589 151.103693181818 705 13 99 3 2 704 536 1238 Procryptobia sorokini HFCC16 28S ribosomal RNA gene, partial sequence blastn 106377 1205 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Parabodonida   Procryptobia Procryptobia sorokini

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;