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contig_metadata

31 rows where analysis = "blastn", bioproject = "PRJNA715461" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 31 ✖

bioproject 1

  • PRJNA715461 · 31 ✖

analysis 1

  • blastn · 31 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
705125 705125 PRJNA715461_S_NODE_441_length_411_cov_1.967456_g367_i0 PRJNA715461 441 411 1.967456 8.08624416 Vermamoeba sp. 1972851 Tubulinea other_Eukaryota 521 2.5e-143   NTclustered gi|2651357782|gb|PP174298.1| 1972851 g367 i0 98.316 19.8880778588808 297 5 72 0 56 352 2597 2301 Vermamoeba sp. isolate 22 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 8174 521 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba sp.
705126 705126 PRJNA715461_S_NODE_821_length_278_cov_374.209756_g747_i0 PRJNA715461 821 278 374.209756 1040.30312168 Ripella sp. GP2 1217115 Discosea other_Eukaryota 291 4.98e-74   NTclustered gi|399764204|gb|JQ271715.1| 1217115 g747 i0 98.193 42.5287769784173 166 3 60 0 107 272 168 3 Ripella sp. GP2 18S ribosomal RNA gene, partial sequence blastn 11823 291 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. GP2
1981133 1981133 PRJNA715461_S_NODE_1022_length_246_cov_27620.306358_g948_i0 PRJNA715461 1022 246 27620.306358 67945.95364068 Ripella sp. GP2 1217115 Discosea other_Eukaryota 279 9.36e-71   NTclustered gi|399764204|gb|JQ271715.1| 1217115 g948 i0 97.546 46.6463414634146 163 4 66 0 7 169 3 165 Ripella sp. GP2 18S ribosomal RNA gene, partial sequence blastn 11475 279 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. GP2
1981141 1981141 PRJNA715461_S_NODE_402_length_431_cov_6615.044693_g328_i0 PRJNA715461 402 431 6615.044693 28510.84262683 Ripella sp. 805 1217113 Discosea other_Eukaryota 566 1.2e-156   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g328 i0 97.866 76.6821345707657 328 6 76 1 21 347 225 552 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 33050 566 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
2467560 2467560 PRJNA715461_S_NODE_142_length_694_cov_10.135266_g98_i0 PRJNA715461 142 694 10.135266 70.33874604 Vermamoeba 1260114 Tubulinea other_Eukaryota 1181 0   NTclustered gi|909719645|gb|KT185625.1| 5778 g98 i0 100 41.7608069164265 639 0 92 0 4 642 4892 5530 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 28982 1181 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
5808778 5808778 PRJNA715461_S_NODE_365_length_452_cov_23.931398_g99_i2 PRJNA715461 365 452 23.931398 108.16991896 Paravannella minima 1443144 Discosea other_Eukaryota 137 1.18e-27   NTclustered gi|1583105587|ref|NC_040955.1| 1443144 g99 i2 76.071 32.8694690265487 280 57 60 9 178 450 50189 49913 Paravannella minima mitochondrion, complete genome blastn 14857 137 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Paravannella Paravannella minima
5808790 5808790 PRJNA715461_S_NODE_985_length_249_cov_27219.721591_g911_i0 PRJNA715461 985 249 27219.721591 67777.10676159 Ripella sp. GP2 1217115 Discosea other_Eukaryota 285 2.0399999999999997e-72   NTclustered gi|399764204|gb|JQ271715.1| 1217115 g911 i0 98.16 46.289156626506 163 3 65 0 81 243 165 3 Ripella sp. GP2 18S ribosomal RNA gene, partial sequence blastn 11526 285 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. GP2
7083794 7083794 PRJNA715461_S_NODE_1866_length_200_cov_36.000000_g1792_i0 PRJNA715461 1866 200 36 72 Ripella sp. 805 1217113 Discosea other_Eukaryota 311 2.6e-80   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g1792 i0 95 103.21 200 7 99 3 3 200 619 817 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 20642 311 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
7083796 7083796 PRJNA715461_S_NODE_366_length_451_cov_15.648148_g293_i0 PRJNA715461 366 451 15.648148 70.57314748 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 787 0   NTclustered gi|909719645|gb|KT185625.1| 5778 g293 i0 100 39.8292682926829 426 0 94 0 4 429 6672 7097 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 17963 787 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
7083797 7083797 PRJNA715461_S_NODE_586_length_352_cov_16920.913978_g512_i0 PRJNA715461 586 352 16920.913978 59561.61720256 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 496 1.28e-135   NTclustered gi|300078496|gb|GU001158.1| 5778 g512 i0 100 101.772727272727 268 0 76 0 82 349 3687 3420 Hartmannella vermiformis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 35824 496 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
7570067 7570067 PRJNA715461_S_NODE_566_length_360_cov_44.700348_g492_i0 PRJNA715461 566 360 44.700348 160.9212528 Ripella 1217112 Discosea other_Eukaryota 505 2.18e-138   NTclustered gi|1269228349|gb|MF683474.1| 2047821 g492 i0 97.635 82.1111111111111 296 3 82 4 67 360 993 700 Ripella platypodia clone 23.4.22 18S ribosomal RNA gene, partial sequence blastn 29560 507 0.996055226824458 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella platypodia
8358459 8358459 PRJNA715461_S_NODE_307_length_496_cov_160.179669_g99_i1 PRJNA715461 307 496 160.179669 794.49115824 Paravannella minima 1443144 Discosea other_Eukaryota 137 1.3e-27   NTclustered gi|1583105587|ref|NC_040955.1| 1443144 g99 i1 76.071 29.9395161290323 280 57 55 9 222 494 50189 49913 Paravannella minima mitochondrion, complete genome blastn 14850 137 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Paravannella Paravannella minima
8845188 8845188 PRJNA715461_S_NODE_767_length_290_cov_21955.912442_g693_i0 PRJNA715461 767 290 21955.912442 63672.1460818 Vannellidae 95227 Discosea other_Eukaryota 348 3.06e-91   NTclustered gi|62865947|gb|AY929922.1| 325065 g693 i0 98.485 65.9896551724138 198 2 68 1 81 277 427 230 Platyamoeba sp. strain CAZ7/I 18S small subunit ribosomal RNA gene, partial sequence blastn 19137 351 0.991452991452991 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba sp. strain CAZ7/I
9633661 9633661 PRJNA715461_S_NODE_1168_length_231_cov_7.360759_g1094_i0 PRJNA715461 1168 231 7.360759 17.00335329 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 379 8.339999999999999e-101   NTclustered gi|1345607048|gb|MG969837.1| 5778 g1094 i0 99.519 90.0476190476191 208 1 90 0 3 210 177 384 Vermamoeba vermiformis isolate Hart4F small subunit ribosomal RNA gene, partial sequence blastn 20801 379 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
9633677 9633677 PRJNA715461_S_NODE_688_length_309_cov_10317.872881_g614_i0 PRJNA715461 688 309 10317.872881 31882.22720229 Ripella sp. GP2 1217115 Discosea other_Eukaryota 385 2.499999999999999e-102   NTclustered gi|399764204|gb|JQ271715.1| 1217115 g614 i0 98.19 65.9611650485437 221 3 72 1 83 303 222 3 Ripella sp. GP2 18S ribosomal RNA gene, partial sequence blastn 20382 385 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. GP2
10120772 10120772 PRJNA715461_S_NODE_1868_length_200_cov_4.417323_g1794_i0 PRJNA715461 1868 200 4.417323 8.834646 Tubulinea 555369 Tubulinea other_Eukaryota 300 5.62e-77   NTclustered gi|399764177|gb|JQ271688.1| 5778 g1794 i0 100 80.965 162 0 81 0 3 164 627 788 Hartmannella vermiformis strain ECH26 18S ribosomal RNA gene, partial sequence blastn 16193 300 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
10120778 10120778 PRJNA715461_S_NODE_568_length_359_cov_17274.629371_g494_i0 PRJNA715461 568 359 17274.629371 62015.91944189 Vannellidae 95227 Discosea other_Eukaryota 488 2.19e-133   NTclustered gi|399764204|gb|JQ271715.1| 1217115 g494 i0 99.625 75.0779944289694 267 1 74 0 81 347 1675 1409 Ripella sp. GP2 18S ribosomal RNA gene, partial sequence blastn 26953 488 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. GP2
10120779 10120779 PRJNA715461_S_NODE_628_length_333_cov_27.373077_g554_i0 PRJNA715461 628 333 27.373077 91.15234641 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 525 1.5399999999999994e-144   NTclustered gi|909719645|gb|KT185625.1| 5778 g554 i0 100 33.1381381381381 284 0 85 0 47 330 3869 3586 Vermamoeba vermiformis isolate 1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 11035 525 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
13458840 13458840 PRJNA715461_S_NODE_931_length_259_cov_37.118280_g857_i0 PRJNA715461 931 259 37.11828 96.1363452 Ripella sp. GP2 1217115 Discosea other_Eukaryota 407 4.37e-109   NTclustered gi|399764204|gb|JQ271715.1| 1217115 g857 i0 95.019 100.880308880309 261 9 100 4 1 259 846 588 Ripella sp. GP2 18S ribosomal RNA gene, partial sequence blastn 26128 407 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. GP2
13946055 13946055 PRJNA715461_S_NODE_1231_length_226_cov_16171.529412_g1157_i0 PRJNA715461 1231 226 16171.529412 36547.65647112 Tubulinea 555369 Tubulinea other_Eukaryota 259 1.1e-64   NTclustered gi|315318893|gb|HQ632781.1| 5778 g1157 i0 99.301 62.0884955752212 143 1 63 0 81 223 532 390 Hartmannella vermiformis strain H-7H 18S ribosomal RNA gene, partial sequence blastn 14032 259 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
17283197 17283197 PRJNA715461_S_NODE_1114_length_237_cov_33388.536585_g1040_i0 PRJNA715461 1114 237 33388.536585 79130.83170645 Ripella platypodia 2047821 Discosea other_Eukaryota 193 1.1999999999999998e-44   NTclustered gi|1269228348|gb|MF683473.1| 2047821 g1040 i0 93.846 50.9704641350211 130 4 54 3 4 131 1142 1269 Ripella platypodia clone 21702 18S ribosomal RNA gene, partial sequence blastn 12080 193 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella platypodia
17283210 17283210 PRJNA715461_S_NODE_534_length_370_cov_16046.528620_g460_i0 PRJNA715461 534 370 16046.52862 59372.155894 Ripella sp. 805 1217113 Discosea other_Eukaryota 457 6.38e-124   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g460 i0 97.398 67.7567567567568 269 6 72 1 21 288 225 493 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 25070 457 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
17283214 17283214 PRJNA715461_S_NODE_874_length_268_cov_371.353846_g800_i0 PRJNA715461 874 268 371.353846 995.22830728 Ripella sp. GP2 1217115 Discosea other_Eukaryota 274 4.81e-69   NTclustered gi|399764204|gb|JQ271715.1| 1217115 g800 i0 96.933 41.910447761194 163 5 61 0 7 169 3 165 Ripella sp. GP2 18S ribosomal RNA gene, partial sequence blastn 11232 274 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. GP2
18556976 18556976 PRJNA715461_S_NODE_875_length_268_cov_328.830769_g801_i0 PRJNA715461 875 268 328.830769 881.26646092 Ripella sp. 805 1217113 Discosea other_Eukaryota 204 6.4e-48   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g801 i0 99.115 46.9216417910448 113 1 42 0 156 268 683 571 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 12575 204 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805
18556977 18556977 PRJNA715461_S_NODE_915_length_262_cov_1.190476_g841_i0 PRJNA715461 915 262 1.190476 3.11904712 Balamuthia mandrillaris 66527 Discosea other_Eukaryota 89.8 1.82e-13   NTclustered gi|2241228763|gb|OM994889.1| 66527 g841 i0 77.632 6.90076335877863 152 30 57 4 72 221 40304 40155 Balamuthia mandrillaris strain KM-20 mitochondrion, complete genome blastn 1808 89.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Balamuthiidae Balamuthia Balamuthia mandrillaris
20318621 20318621 PRJNA715461_S_NODE_576_length_357_cov_805.950704_g502_i0 PRJNA715461 576 357 805.950704 2877.24401328 Vannellidae 95227 Discosea other_Eukaryota 416 1.04e-111   NTclustered gi|62865947|gb|AY929922.1| 325065 g502 i0 98.723 63.9831932773109 235 2 66 1 111 344 464 230 Platyamoeba sp. strain CAZ7/I 18S small subunit ribosomal RNA gene, partial sequence blastn 22842 420 0.990476190476191 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba sp. strain CAZ7/I
20318622 20318622 PRJNA715461_S_NODE_696_length_307_cov_4.307692_g622_i0 PRJNA715461 696 307 4.307692 13.22461444 Tubulinea 555369 Tubulinea other_Eukaryota 468 2.4e-127   NTclustered gi|399764177|gb|JQ271688.1| 5778 g622 i0 100 82.4104234527687 253 0 82 0 52 304 390 138 Hartmannella vermiformis strain ECH26 18S ribosomal RNA gene, partial sequence blastn 25300 468 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis
22382700 22382700 PRJNA715461_S_NODE_398_length_432_cov_13275.571031_g324_i0 PRJNA715461 398 432 13275.571031 57350.46685392 Ripella sp. GP2 1217115 Discosea other_Eukaryota 562 1.56e-155   NTclustered gi|399764204|gb|JQ271715.1| 1217115 g324 i0 97.576 76.6666666666667 330 5 76 3 21 348 242 570 Ripella sp. GP2 18S ribosomal RNA gene, partial sequence blastn 33120 562 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. GP2
24143814 24143814 PRJNA715461_S_NODE_1479_length_212_cov_4.798561_g1405_i0 PRJNA715461 1479 212 4.798561 10.17294932 Tubulinea 555369 Tubulinea other_Eukaryota 315 2.15e-81   NTclustered gi|11527302|gb|AF293895.1|AF293895 136450 g1405 i0 100 80.1556603773585 170 0 80 0 40 209 1159 990 Echinamoeba exundans small subunit ribosomal RNA gene, complete sequence blastn 16993 315 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida   Echinamoebidae Echinamoeba Echinamoeba exundans
24143824 24143824 PRJNA715461_S_NODE_639_length_329_cov_18674.265625_g565_i0 PRJNA715461 639 329 18674.265625 61438.33390625 Vannellidae 95227 Discosea other_Eukaryota 416 9.529999999999997e-112   NTclustered gi|62865947|gb|AY929922.1| 325065 g565 i0 98.723 69.4285714285714 235 2 71 1 83 316 464 230 Platyamoeba sp. strain CAZ7/I 18S small subunit ribosomal RNA gene, partial sequence blastn 22842 420 0.990476190476191 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Platyamoeba Platyamoeba sp. strain CAZ7/I
24931700 24931700 PRJNA715461_S_NODE_920_length_261_cov_45.085106_g846_i0 PRJNA715461 920 261 45.085106 117.67212666 Ripella sp. 805 1217113 Discosea other_Eukaryota 381 2.669999999999999e-101   NTclustered gi|399764202|gb|JQ271713.1| 1217113 g846 i0 93.87 100.318007662835 261 2 100 6 1 261 817 571 Ripella sp. 805 18S ribosomal RNA gene, partial sequence blastn 26183 381 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Ripella Ripella sp. 805

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;