RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA713989" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA713989 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8844240 8844240 PRJNA713989_S_NODE_5387_length_228_cov_1.139665_g5327_i0 PRJNA713989 5387 228 1.139665 2.5984362 Opisthokonta 33154 Fungi Fungi 422 1.34e-113   NTclustered gi|325484983|gb|HQ407432.1| 5061 g5327 i0 100 97.8859649122807 228 0 100 0 1 228 523 750 Aspergillus niger strain B1.Eg mitochondrial citrate synthase precursor, gene, partial cds; nuclear gene for mitochondrial product blastn 22318 422 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus niger
14732362 14732362 PRJNA713989_S_NODE_13392_length_163_cov_0.894737_g13332_i0 PRJNA713989 13392 163 0.894737 1.45842131 Ogataea haglerorum 1937702 Fungi Fungi 124 2.84e-24   NTclustered gi|2085292353|ref|XM_043198731.1| 1937702 g13332 i0 80.723 11.1656441717791 166 26 100 6 1 163 1070 1232 Ogataea haglerorum uncharacterized protein (KL911_000354), partial mRNA blastn 1820 124 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Pichiales Pichiaceae Ogataea Ogataea haglerorum
22380989 22380989 PRJNA713989_S_NODE_2278_length_328_cov_1.347670_g2218_i0 PRJNA713989 2278 328 1.34767 4.4203576 uncultured Ascomycota 175243 Fungi Fungi 579 1.1399999999999999e-160   NTclustered gi|170516640|gb|EU490036.1| 175243 g2218 i0 98.476 100 328 5 100 0 1 328 730 1057 Uncultured Ascomycota clone C31_A08 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 32800 579 1 Eukaryota Opisthokonta Fungi Ascomycota         uncultured Ascomycota
22868677 22868677 PRJNA713989_S_NODE_14698_length_152_cov_2.475728_g14638_i0 PRJNA713989 14698 152 2.475728 3.76310656 root 1 Root_unresolved Root_unresolved 281 1.46e-71   NTclustered gi|259018342|gb|GQ458030.1| 29917 g14638 i0 100 100 152 0 100 0 1 152 1387 1538 Cladosporium cladosporioides strain MA09-AO 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 15200 281 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;