RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA706190" and tax_superkingdom = "Viruses"

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tax_kingdom 2

tax_superkingdom 1

  • Viruses · 4 ✖

bioproject 1

  • PRJNA706190 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7081388 7081388 PRJNA706190_P_NODE_50646_length_169_cov_0.866667_g50510_i0 PRJNA706190 50646 169 0.866667 1.46466723 Caudoviricetes sp. 2832643 Viruses Viruses 307 2.73e-79   NTclustered gi|2058071592|tpg|BK042950.1| 2832643 g50510 i0 99.408 30.810650887574 169 1 100 0 1 169 8686 8854 MAG TPA_asm: Caudoviricetes sp. isolate ct9Dg12, partial genome blastn 5207 307 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
13456470 13456470 PRJNA706190_P_NODE_82791_length_163_cov_1.368421_g82655_i0 PRJNA706190 82791 163 1.368421 2.23052623 Caudoviricetes sp. 2832643 Viruses Viruses 276 7.41e-70   NTclustered gi|2058148954|tpg|BK034473.1| 2832643 g82655 i0 98.101 1.8159509202454 158 3 97 0 6 163 13104 12947 MAG TPA_asm: Caudoviricetes sp. isolate ctWKI2, partial genome blastn 296 276 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
16005327 16005327 PRJNA706190_P_NODE_36693_length_181_cov_2.916667_g36557_i0 PRJNA706190 36693 181 2.916667 5.27916727 Seadornavirus kadipiroense 3241299 Viruses Viruses 287 3.87e-73   NTclustered gi|2083529919|tpd|BR001724.1| 104580 g36557 i0 99.371 2.60220994475138 159 0 87 1 1 158 1277 1119 TPA_asm: Kadipiro virus rat/2019/395 gene for VP4 protein, complete cds blastn 471 287 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Seadornavirus Seadornavirus kadipiroense
22380157 22380157 PRJNA706190_P_NODE_12018_length_228_cov_2.033520_g11882_i0 PRJNA706190 12018 228 2.03352 4.6364256 Varicellovirus cercopithecinealpha9 3050257 Viruses Viruses 411 2.909999999999999e-110   NTclustered gi|126882977|ref|NC_002686.2| 35246 g11882 i0 99.127 1.00438596491228 229 0 100 2 1 228 103670 103443 Cercopithecine herpesvirus 9, complete genome blastn 229 411 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Varicellovirus Varicellovirus cercopithecinealpha9

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;