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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA704949" and tax_phylum = "Thermoproteota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoproteota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA704949 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1962280 1962280 PRJNA704949_P_NODE_1038182_length_254_cov_2.029268_g1022846_i0 PRJNA704949 1038182 254 2.029268 5.15434072 uncultured crenarchaeote 29281 Archaea Archaea 444 3.26e-120   NTclustered gi|42557759|emb|AJ627422.1| 29281 g1022846 i0 98.413 101.846456692913 252 4 99 0 3 254 42271 42522 Uncultured crenarchaeote genomic fragment 54d9 blastn 25869 444 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
7066395 7066395 PRJNA704949_P_NODE_1227986_length_229_cov_1.155556_g1212649_i0 PRJNA704949 1227986 229 1.155556 2.64622324 Pyrobaculum aerophilum 13773 Archaea Archaea 383 6.38e-102   NTclustered gi|18308975|gb|AE009441.1| 178306 g1212649 i0 99.061 5.04803493449782 213 2 93 0 17 229 303641 303853 Pyrobaculum aerophilum str. IM2, complete genome blastn 1156 383 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Pyrobaculum Pyrobaculum aerophilum
10906434 10906434 PRJNA704949_P_NODE_979089_length_264_cov_0.967442_g963754_i0 PRJNA704949 979089 264 0.967442 2.55404688 uncultured crenarchaeote 29281 Archaea Archaea 311 3.6e-80   NTclustered gi|22797874|emb|AJ496176.1| 29281 g963754 i0 87.97 19.5378787878788 266 28 100 4 1 264 7442 7705 Uncultured crenarchaeote 34 kb genomic fragment blastn 5158 311 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote
24921696 24921696 PRJNA704949_P_NODE_2165420_length_162_cov_0.920354_g2150081_i0 PRJNA704949 2165420 162 0.920354 1.49097348 Acidianus sulfidivorans 312539 Archaea Archaea 52.8 0.013   NTclustered gi|1820310478|gb|CP029288.2| 619593 g2150081 i0 96.774 0.191358024691358 31 1 19 0 113 143 1379992 1380022 Acidianus sulfidivorans JP7 chromosome, complete genome blastn 31 52.8 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Acidianus Acidianus sulfidivorans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;