RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA704949" and tax_phylum = "Synergistota"

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tax_superkingdom 1

tax_phylum 1

  • Synergistota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA704949 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2465396 2465396 PRJNA704949_P_NODE_655382_length_334_cov_1.607018_g640056_i0 PRJNA704949 655382 334 1.607018 5.36744012 Cloacibacillus 508459 Bacteria Bacteria 575 1.5099999999999999e-159   NTclustered gi|1050315908|gb|CP016757.1| 1197717 g640056 i0 99.682 4.95808383233533 314 1 94 0 21 334 1266519 1266832 Cloacibacillus porcorum strain CL-84 chromosome, complete genome blastn 1656 575 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae Cloacibacillus Cloacibacillus porcorum
7069501 7069501 PRJNA704949_P_NODE_1610066_length_192_cov_1.090909_g1594727_i0 PRJNA704949 1610066 192 1.090909 2.09454528 Fretibacterium fastidiosum 651822 Bacteria Bacteria 307 3.2e-79   NTclustered gi|2869663113|emb|OZ209244.1| 651822 g1594727 i0 98.837 1.79166666666667 172 2 90 0 1 172 2645832 2646003 Fretibacterium fastidiosum strain SGP1 genome assembly, chromosome: Ff3 blastn 344 307 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Fretibacterium Fretibacterium fastidiosum
25415676 25415676 PRJNA704949_P_NODE_364520_length_449_cov_1.967500_g349493_i0 PRJNA704949 364520 449 1.9675 8.834075 Bacteria 2 Bacteria Bacteria 787 0   NTclustered gi|1050315908|gb|CP016757.1| 1197717 g349493 i0 99.767 4.80400890868597 429 1 96 0 1 429 1267268 1266840 Cloacibacillus porcorum strain CL-84 chromosome, complete genome blastn 2157 787 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae Cloacibacillus Cloacibacillus porcorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;