RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA704949" and tax_phylum = "Porifera"

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tax_superkingdom 1

tax_phylum 1

  • Porifera · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA704949 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9625992 9625992 PRJNA704949_P_NODE_40708_length_1207_cov_6.621762_g30704_i0 PRJNA704949 40708 1207 6.621762 79.92466734 Sycon ciliatum 27933 Porifera other_Eukaryota 54.7 0.034   NTclustered gi|2732931524|ref|XM_065332834.1| 27933 g30704 i0 100 0.024026512013256 29 0 2 0 1018 1046 467 495 PREDICTED: Sycon ciliatum uncharacterized LOC135819598 (LOC135819598), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum
9630047 9630047 PRJNA704949_P_NODE_86208_length_836_cov_6.077510_g30704_i1 PRJNA704949 86208 836 6.07751 50.8079836 Sycon ciliatum 27933 Porifera other_Eukaryota 54.7 0.023   NTclustered gi|2732931524|ref|XM_065332834.1| 27933 g30704 i1 100 0.034688995215311 29 0 3 0 162 190 495 467 PREDICTED: Sycon ciliatum uncharacterized LOC135819598 (LOC135819598), mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum
12180035 12180035 PRJNA704949_P_NODE_776290_length_303_cov_2.118110_g760959_i0 PRJNA704949 776290 303 2.11811 6.4178733 Halichondria panicea 6063 Porifera other_Eukaryota 52.8 0.028   NTclustered gi|2719014049|ref|XM_064540739.1| 6063 g760959 i0 96.875 0.105610561056106 32 0 11 1 210 241 1483 1453 PREDICTED: Halichondria panicea uncharacterized LOC135343734 (LOC135343734), mRNA blastn 32 52.8 1 Eukaryota Opisthokonta Metazoa Porifera Demospongiae Suberitida Halichondriidae Halichondria Halichondria panicea
16001830 16001830 PRJNA704949_P_NODE_609293_length_347_cov_3.030201_g593970_i0 PRJNA704949 609293 347 3.030201 10.51479747 Sycon ciliatum 27933 Porifera other_Eukaryota 56.5 0.003   NTclustered gi|2732940498|ref|XM_065337428.1| 27933 g593970 i0 97.059 0.0979827089337176 34 0 10 1 248 281 1325 1293 PREDICTED: Sycon ciliatum uncharacterized LOC135824720 (LOC135824720), mRNA blastn 34 56.5 1 Eukaryota Opisthokonta Metazoa Porifera Calcarea Leucosolenida Sycettidae Sycon Sycon ciliatum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;