RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA704949" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA704949 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8838828 8838828 PRJNA704949_P_NODE_1241107_length_227_cov_1.752809_g1225770_i0 PRJNA704949 1241107 227 1.752809 3.97887643 Viruses 10239 Viruses Viruses 69.4 2.01e-7   NTclustered gi|2557652486|emb|OY682391.1| 2697049 g1225770 i0 95.455 16.8370044052863 44 0 19 2 1 44 11279 11238 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 3822 69.4 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
12180013 12180013 PRJNA704949_P_NODE_772610_length_304_cov_1.819608_g757279_i0 PRJNA704949 772610 304 1.819608 5.53160832 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 52.8 0.028   NTclustered gi|2196304047|gb|MZ679036.1| 3003959 g757279 i0 94.286 0.115131578947368 35 1 12 1 143 177 4155 4188 MAG: Picornavirales sp. isolate s56-k141_864870 putative polyprotein gene, complete cds blastn 35 52.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;