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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA704949" and tax_phylum = "Oomycota"

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tax_superkingdom 1

tax_phylum 1

  • Oomycota · 11 ✖

tax_clade 1

bioproject 1

  • PRJNA704949 · 11 ✖

analysis 1

  • blastn · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3238526 3238526 PRJNA704949_P_NODE_1193103_length_233_cov_1.407609_g1177766_i0 PRJNA704949 1193103 233 1.407609 3.27972897 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 108 4.39e-19   NTclustered gi|695403836|ref|XM_009525087.1| 67593 g1177766 i0 88.636 2.60944206008584 88 10 38 0 18 105 346 259 Phytophthora sojae hypothetical protein mRNA blastn 608 108 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
5798471 5798471 PRJNA704949_P_NODE_2114485_length_163_cov_2.736842_g2099146_i0 PRJNA704949 2114485 163 2.736842 4.46105246 Peronosclerospora sorghi 230839 SAR_Eukaryotes SAR_Eukaryotes 117 4.75e-22   NTclustered gi|2431515601|ref|NC_070108.1| 230839 g2099146 i0 79.878 16.2453987730061 164 29 99 4 2 163 37470 37631 Peronosclerospora sorghi isolate P6 mitochondrion, complete genome blastn 2648 117 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronosclerospora Peronosclerospora sorghi
9623821 9623821 PRJNA704949_P_NODE_2173408_length_162_cov_0.920354_g2158069_i0 PRJNA704949 2173408 162 0.920354 1.49097348 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 239 9.64e-59   NTclustered gi|325193489|emb|FR824676.1| 890382 g2158069 i0 93.865 2.01851851851852 163 3 100 5 1 162 6006 5850 Albugo laibachii Nc14, genomic contig CONTIG_697_NC14_v4_7373_108 blastn 327 239 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
10892516 10892516 PRJNA704949_P_NODE_1304809_length_220_cov_1.520468_g1289472_i0 PRJNA704949 1304809 220 1.520468 3.3450296 Saprolegnia diclina 112098 SAR_Eukaryotes SAR_Eukaryotes 58.4 4.19e-4   NTclustered gi|669151135|ref|XM_008612908.1| 1156394 g1289472 i0 97.059 0.677272727272727 34 1 15 0 105 138 298 265 Saprolegnia diclina VS20 hypothetical protein mRNA blastn 149 58.4 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia diclina
14717760 14717760 PRJNA704949_P_NODE_134892_length_691_cov_3.186916_g121697_i0 PRJNA704949 134892 691 3.186916 22.02158956 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 1225 0   NTclustered gi|325194231|emb|FR825088.1| 890382 g121697 i0 99.12 8.60057887120116 682 5 99 1 10 691 882 1562 Albugo laibachii Nc14, genomic contig CONTIG_1612_NC14_v4_1853_85 blastn 5943 1225 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
14723431 14723431 PRJNA704949_P_NODE_206132_length_578_cov_3.124764_g191930_i0 PRJNA704949 206132 578 3.124764 18.06113592 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 749 0   NTclustered gi|325194231|emb|FR825088.1| 890382 g191930 i0 94.512 1.37024221453287 492 15 85 1 1 492 480 1 Albugo laibachii Nc14, genomic contig CONTIG_1612_NC14_v4_1853_85 blastn 792 749 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
16002671 16002671 PRJNA704949_P_NODE_70793_length_914_cov_2.615029_g59239_i0 PRJNA704949 70793 914 2.615029 23.90136506 Plasmopara halstedii 4781 SAR_Eukaryotes SAR_Eukaryotes 58.4 0.002   NTclustered gi|1378144770|ref|XM_024728103.1| 4781 g59239 i0 97.059 0.037199124726477 34 1 4 0 195 228 117 150 Plasmopara halstedii uncharacterized protein (PHALS_00122), partial mRNA blastn 34 58.4 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Plasmopara Plasmopara halstedii
17269849 17269849 PRJNA704949_P_NODE_1739874_length_182_cov_1.172932_g1724535_i0 PRJNA704949 1739874 182 1.172932 2.13473624 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 267 5.08e-67   NTclustered gi|166046574|emb|CU367691.1| 100861 g1724535 i0 100 1.58791208791209 144 0 79 0 21 164 418 275 Aphanomyces euteiches cDNA blastn 289 267 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
17271471 17271471 PRJNA704949_P_NODE_1947114_length_169_cov_0.866667_g1931775_i0 PRJNA704949 1947114 169 0.866667 1.46466723 Peronospora sanguisorbae 162112 SAR_Eukaryotes SAR_Eukaryotes 283 4.6e-72   NTclustered gi|33520209|gb|AY273954.1| 162112 g1931775 i0 98.148 95.8165680473373 162 3 96 0 1 162 223 384 Peronospora sanguisorbae large subunit ribosomal RNA gene, partial sequence blastn 16193 283 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Peronospora Peronospora sanguisorbae
18540145 18540145 PRJNA704949_P_NODE_1298735_length_221_cov_1.209302_g1283398_i0 PRJNA704949 1298735 221 1.209302 2.67255742 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 86.1 1.93e-12   NTclustered gi|325194219|emb|FR825080.1| 890382 g1283398 i0 98 0.226244343891403 50 0 23 1 169 218 1872 1824 Albugo laibachii Nc14, genomic contig CONTIG_1593_NC14_v4_1885_55 blastn 50 86.1 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
22368096 22368096 PRJNA704949_P_NODE_1601758_length_192_cov_2.545455_g1586419_i0 PRJNA704949 1601758 192 2.545455 4.8872736 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 110 9.67e-20   NTclustered gi|325194684|emb|FR825494.1| 890382 g1586419 i0 78.613 83.765625 173 31 89 6 23 192 202 33 Albugo laibachii Nc14, genomic contig CONTIG_2365_NC14_v4_847_33331 blastn 16083 110 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;