RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA704949" and tax_phylum = "Elusimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Elusimicrobiota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA704949 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7073162 7073162 PRJNA704949_P_NODE_2065926_length_165_cov_0.896552_g2050587_i0 PRJNA704949 2065926 165 0.896552 1.4793108 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 54.7 0.004   NTclustered gi|2233025045|gb|CP096137.1| 2030800 g2050587 i0 100 0.175757575757576 29 0 18 0 94 122 2118097 2118125 MAG: Elusimicrobia bacterium isolate JAD_PAG50586_1 chromosome, complete genome blastn 29 54.7 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
17269705 17269705 PRJNA704949_P_NODE_1724074_length_183_cov_1.552239_g1708735_i0 PRJNA704949 1724074 183 1.552239 2.84059737 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 78.7 2.57e-10   NTclustered gi|2233025045|gb|CP096137.1| 2030800 g1708735 i0 92.593 5.51366120218579 54 4 30 0 22 75 3254082 3254029 MAG: Elusimicrobia bacterium isolate JAD_PAG50586_1 chromosome, complete genome blastn 1009 78.7 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
24913537 24913537 PRJNA704949_P_NODE_115320_length_738_cov_2.626996_g102514_i0 PRJNA704949 115320 738 2.626996 19.38723048 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 398 8.239999999999995e-106   NTclustered gi|2233025045|gb|CP096137.1| 2030800 g102514 i0 82.34 24.0189701897019 470 71 63 8 23 489 2981637 2981177 MAG: Elusimicrobia bacterium isolate JAD_PAG50586_1 chromosome, complete genome blastn 17726 398 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;