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contig_metadata

30 rows where analysis = "blastn", bioproject = "PRJNA704949" and tax_phylum = "Chlorophyta"

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tax_superkingdom 1

tax_phylum 1

  • Chlorophyta · 30 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA704949 · 30 ✖

analysis 1

  • blastn · 30 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
691508 691508 PRJNA704949_P_NODE_1691821_length_185_cov_2.669118_g1676482_i0 PRJNA704949 1691821 185 2.669118 4.9378683 Aegagropila linnaei 162062 Plants Plants 219 1.4699999999999996e-52   NTclustered gi|1169296929|gb|KY364699.1| 162062 g1676482 i0 89.941 74.3027027027027 169 17 91 0 17 185 4505 4337 Aegagropila linnaei 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 13746 219 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Cladophorales Pithophoraceae Aegagropila Aegagropila linnaei
1962284 1962284 PRJNA704949_P_NODE_1038902_length_254_cov_1.775610_g1023566_i0 PRJNA704949 1038902 254 1.77561 4.5100494 Chlamydomonas reinhardtii 3055 Plants Plants 56.5 0.002   NTclustered gi|2082253998|ref|XM_043065709.1| 3055 g1023566 i0 94.595 0.511811023622047 37 1 15 1 184 220 4323 4288 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_09g394150v5), mRNA blastn 130 56.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
1968223 1968223 PRJNA704949_P_NODE_177302_length_616_cov_3.564374_g163452_i0 PRJNA704949 177302 616 3.564374 21.95654384 Mantoniella tinhauana 3097027 Plants Plants 95.3 1e-14   NTclustered gi|2735153278|gb|CP140063.1| 3097027 g163452 i0 95 0.173701298701299 60 3 10 0 259 318 2450700 2450641 Mantoniella tinhauana isolate LFS chromosome 2 blastn 107 95.3 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Mantoniella Mantoniella tinhauana
1975896 1975896 PRJNA704949_P_NODE_680202_length_327_cov_1.827338_g664874_i0 PRJNA704949 680202 327 1.827338 5.97539526 Volvox carteri 3067 Plants Plants 54.7 0.009   NTclustered gi|302832440|ref|XM_002947739.1| 3068 g664874 i0 100 0.0886850152905199 29 0 9 0 172 200 3076 3048 Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_88018), partial mRNA blastn 29 54.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
3241818 3241818 PRJNA704949_P_NODE_1594183_length_193_cov_1.444444_g1578844_i0 PRJNA704949 1594183 193 1.444444 2.78777692 Chloroidium sp. KL-2023a 3031248 Plants Plants 298 1.94e-76   NTclustered gi|2450595352|gb|ON986219.1| 3031248 g1578844 i0 97.688 6.01554404145078 173 4 90 0 1 173 96079 95907 Chloroidium sp. KL-2023a clone 2023 chloroplast, complete genome blastn 1161 298 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Chloroidium Chloroidium sp. KL-2023a
4527927 4527927 PRJNA704949_P_NODE_655784_length_334_cov_1.431579_g640458_i0 PRJNA704949 655784 334 1.431579 4.78147386 Chlamydomonas reinhardtii 3055 Plants Plants 54.7 0.009   NTclustered gi|2082235944|ref|XM_043058291.1| 3055 g640458 i0 90.476 0.125748502994012 42 2 12 2 159 199 3445 3485 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_01g010650v5), mRNA blastn 42 54.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
5792568 5792568 PRJNA704949_P_NODE_1384625_length_212_cov_0.957055_g1369287_i0 PRJNA704949 1384625 212 0.957055 2.0289566 Chlorella variabilis 554065 Plants Plants 56.5 0.001   NTclustered gi|552841236|ref|XM_005850190.1| 554065 g1369287 i0 97.059 0.160377358490566 34 0 16 1 66 99 391 423 Chlorella variabilis hypothetical protein (CHLNCDRAFT_141931) mRNA, complete cds blastn 34 56.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
7069032 7069032 PRJNA704949_P_NODE_1554826_length_196_cov_1.503401_g1539487_i0 PRJNA704949 1554826 196 1.503401 2.94666596 Desmodesmus abundans 77547 Plants Plants 350 5.37e-92   NTclustered gi|2312613210|ref|NC_066651.1| 77547 g1539487 i0 98.974 155.270408163265 195 2 99 0 2 196 76756 76950 Desmodesmus abundans strain FBCC-A1277 chloroplast, complete genome blastn 30433 350 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Desmodesmus Desmodesmus abundans
7079973 7079973 PRJNA704949_P_NODE_850666_length_287_cov_1.869748_g835332_i0 PRJNA704949 850666 287 1.869748 5.36617676 Chlamydomonas reinhardtii 3055 Plants Plants 60.2 1.59e-4   NTclustered gi|2082267218|ref|XM_043070986.1| 3055 g835332 i0 100 0.209059233449477 32 0 11 0 49 80 429 398 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_16g660850v5), mRNA blastn 60 60.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
7565629 7565629 PRJNA704949_P_NODE_1886226_length_171_cov_2.500000_g1870887_i0 PRJNA704949 1886226 171 2.5 4.275 Scenedesmaceae 3086 Plants Plants 263 6.08e-66   NTclustered gi|1642520538|ref|NC_042181.1| 152631 g1870887 i0 98.026 132.409356725146 152 2 88 1 21 171 109079 109230 Coelastrella saipanensis chloroplast, complete genome blastn 22642 263 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Coelastrella Coelastrella saipanensis
8347727 8347727 PRJNA704949_P_NODE_2061527_length_165_cov_1.163793_g2046188_i0 PRJNA704949 2061527 165 1.163793 1.92025845 Bathycoccus prasinos 41875 Plants Plants 52.8 0.014   NTclustered gi|612399817|ref|XM_007515366.1| 41875 g2046188 i0 100 0.16969696969697 28 0 17 0 2 29 269 242 Bathycoccus prasinos predicted protein (Bathy01g06900), partial mRNA blastn 28 52.8 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Bathycoccaceae Bathycoccus Bathycoccus prasinos
8351538 8351538 PRJNA704949_P_NODE_495807_length_387_cov_1.502959_g480551_i0 PRJNA704949 495807 387 1.502959 5.81645133 Chlamydomonas reinhardtii 3055 Plants Plants 52.8 0.037   NTclustered gi|2082255190|ref|XM_043066057.1| 3055 g480551 i0 100 0.0723514211886305 28 0 7 0 282 309 8394 8421 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_09g402108v5), mRNA blastn 28 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
10893416 10893416 PRJNA704949_P_NODE_1420269_length_208_cov_1.635220_g1404931_i0 PRJNA704949 1420269 208 1.63522 3.4012576 Coccomyxa subellipsoidea 248742 Plants Plants 115 2.29e-21   NTclustered gi|545367034|ref|XM_005648326.1| 574566 g1404931 i0 82.609 0.663461538461538 138 16 64 7 12 145 1121 1254 Coccomyxa subellipsoidea C-169 3-deoxy-D-arabino-heptulosonate 7-phosphate synthetase partial mRNA blastn 138 115 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
10898122 10898122 PRJNA704949_P_NODE_2003209_length_167_cov_0.881356_g1987870_i0 PRJNA704949 2003209 167 0.881356 1.47186452 Micromonas commoda 296587 Plants Plants 52.8 0.014   NTclustered gi|255070708|ref|XM_002507390.1| 296587 g1987870 i0 100 0.167664670658683 28 0 17 0 7 34 2026 2053 Micromonas commoda predicted protein partial mRNA blastn 28 52.8 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Micromonas Micromonas commoda
12168219 12168219 PRJNA704949_P_NODE_1360170_length_214_cov_1.575758_g1344832_i0 PRJNA704949 1360170 214 1.575758 3.37212212 Mantoniella tinhauana 3097027 Plants Plants 52.8 0.019   NTclustered gi|2735153297|gb|CP140082.1| 3097027 g1344832 i0 100 0.130841121495327 28 0 13 0 111 138 21085 21112 Mantoniella tinhauana isolate LFS chromosome 21 blastn 28 52.8 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Mantoniella Mantoniella tinhauana
12172729 12172729 PRJNA704949_P_NODE_1922650_length_169_cov_1.391667_g1907311_i0 PRJNA704949 1922650 169 1.391667 2.35191723 Tetradesmus obliquus 3088 Plants Plants 279 5.95e-71   NTclustered gi|1240946771|gb|KX756229.1| 3088 g1907311 i0 99.351 134.887573964497 154 1 91 0 16 169 81955 82108 Tetradesmus obliquus chloroplast, complete genome blastn 22796 279 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Tetradesmus Tetradesmus obliquus
14723980 14723980 PRJNA704949_P_NODE_2140892_length_163_cov_0.912281_g2125553_i0 PRJNA704949 2140892 163 0.912281 1.48701803 Coccomyxa subellipsoidea 248742 Plants Plants 52.8 0.014   NTclustered gi|545363571|ref|XM_005646850.1| 574566 g2125553 i0 100 0.171779141104294 28 0 17 0 16 43 1068 1095 Coccomyxa subellipsoidea C-169 hypothetical protein partial mRNA blastn 28 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
15990784 15990784 PRJNA704949_P_NODE_127633_length_708_cov_1.444613_g114576_i0 PRJNA704949 127633 708 1.444613 10.22786004 Chlamydomonas reinhardtii 3055 Plants Plants 54.7 0.02   NTclustered gi|2082252966|ref|XM_043065204.1| 3055 g114576 i0 100 0.0819209039548023 29 0 4 0 17 45 3269 3241 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_08g377750v5), mRNA blastn 58 54.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
15992635 15992635 PRJNA704949_P_NODE_1505893_length_200_cov_1.894040_g1490555_i0 PRJNA704949 1505893 200 1.89404 3.78808 Binuclearia lauterbornii 3087189 Plants Plants 91.6 3.68e-14   NTclustered gi|2724824417|gb|PP746559.1| 3087189 g1490555 i0 79.851 2.72 134 20 64 7 1 128 5880 5748 Binuclearia lauterbornii culture SAG:68.94 mitochondrion, complete genome blastn 544 91.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Oocystaceae Binuclearia Binuclearia lauterbornii
15994817 15994817 PRJNA704949_P_NODE_1779873_length_179_cov_1.200000_g1764534_i0 PRJNA704949 1779873 179 1.2 2.148 Chlamydomonas reinhardtii 3055 Plants Plants 58.4 3.26e-4   NTclustered gi|2082255552|ref|XM_043066273.1| 3055 g1764534 i0 97.059 0.379888268156425 34 1 19 0 121 154 790 823 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_09g411500v5), mRNA blastn 68 58.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
16004306 16004306 PRJNA704949_P_NODE_894253_length_279_cov_1.017391_g878919_i0 PRJNA704949 894253 279 1.017391 2.83852089 Chlamydomonas reinhardtii 3055 Plants Plants 52.8 0.026   NTclustered gi|2082268686|ref|XM_043071260.1| 3055 g878919 i0 100 0.100358422939068 28 0 10 0 210 237 1112 1139 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_16g674964v5), mRNA blastn 28 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
16488395 16488395 PRJNA704949_P_NODE_1044473_length_253_cov_2.147059_g1029137_i0 PRJNA704949 1044473 253 2.147059 5.43205927 root 1 Root_unresolved Root_unresolved 54.7 0.006   NTclustered gi|2082262860|ref|XM_043069209.1| 3055 g1029137 i0 100 0.462450592885375 29 0 11 0 178 206 3406 3434 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_13g563300v5), mRNA blastn 117 54.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
18542040 18542040 PRJNA704949_P_NODE_1537015_length_198_cov_1.046980_g1521676_i0 PRJNA704949 1537015 198 1.04698 2.0730204 Koliella sp. HS-2024a 3231931 Plants Plants 97.1 7.82e-16   NTclustered gi|2754686564|gb|PP990794.1| 3231931 g1521676 i0 93.75 0.570707070707071 64 4 32 0 127 190 9627 9564 Koliella sp. HS-2024a strain FACHB-3607 mitochondrion, complete genome blastn 113 97.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Prasiolales Koliellaceae Koliella Koliella sp. HS-2024a
19039645 19039645 PRJNA704949_P_NODE_1906775_length_170_cov_1.520661_g1891436_i0 PRJNA704949 1906775 170 1.520661 2.5851237 Coccomyxa 41891 Plants Plants 178 2.25e-40   NTclustered gi|1360638129|gb|AC277064.1| 574566 g1891436 i0 94.737 73.4705882352941 114 6 67 0 13 126 1140 1027 Coccomyxa subellipsoidea C-169 clone FAHX137-B20, complete sequence blastn 12490 178 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
19815225 19815225 PRJNA704949_P_NODE_1289116_length_222_cov_1.202312_g1273779_i0 PRJNA704949 1289116 222 1.202312 2.66913264 Chloroidium sp. KL-2023a 3031248 Plants Plants 372 1.33e-98   NTclustered gi|2450595352|gb|ON986219.1| 3031248 g1273779 i0 96.847 25.4504504504505 222 7 100 0 1 222 209330 209109 Chloroidium sp. KL-2023a clone 2023 chloroplast, complete genome blastn 5650 372 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Chloroidium Chloroidium sp. KL-2023a
20314440 20314440 PRJNA704949_P_NODE_1996956_length_167_cov_0.881356_g1981617_i0 PRJNA704949 1996956 167 0.881356 1.47186452 Eukaryota 2759 Plants Plants 54.7 0.004   NTclustered gi|302839110|ref|XM_002951067.1| 3068 g1981617 i0 100 0.868263473053892 29 0 17 0 9 37 1071 1099 Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_91589), partial mRNA blastn 145 54.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
21092428 21092428 PRJNA704949_P_NODE_1490417_length_202_cov_1.019608_g1475079_i0 PRJNA704949 1490417 202 1.019608 2.05960816 Monoraphidium neglectum 145388 Plants Plants 54.7 0.005   NTclustered gi|926783519|ref|XM_014044780.1| 145388 g1475079 i0 100 0.564356435643564 29 0 14 0 107 135 2671 2643 Monoraphidium neglectum hypothetical protein mRNA blastn 114 54.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
22364299 22364299 PRJNA704949_P_NODE_1140858_length_240_cov_1.089005_g1125522_i0 PRJNA704949 1140858 240 1.089005 2.613612 Ostreococcus sp. 'lucimarinus' 242159 Plants Plants 75 4.61e-9   NTclustered gi|145355246|ref|XM_001421839.1| 436017 g1125522 i0 88.525 3.65416666666667 61 7 25 0 5 65 15 75 Ostreococcus lucimarinus CCE9901 Ribosomal protein S4, component of cytosolic 80S ribosome and 40S small subunit (RPS4), partial mRNA blastn 877 75 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Bathycoccaceae Ostreococcus Ostreococcus sp. 'lucimarinus'
22369456 22369456 PRJNA704949_P_NODE_1770698_length_180_cov_0.923664_g1755359_i0 PRJNA704949 1770698 180 0.923664 1.6625952 Eudorina elegans 47282 Plants Plants 86.1 1.51e-12   NTclustered gi|2089721503|gb|MZ445421.1| 47282 g1755359 i0 81.731 1.57777777777778 104 17 57 2 42 144 386 488 Eudorina elegans strain NIES-458 small nucleolar ribonucleoprotein U3 component mRNA, partial cds blastn 284 86.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Eudorina Eudorina elegans
24921113 24921113 PRJNA704949_P_NODE_2084640_length_164_cov_1.808696_g2069301_i0 PRJNA704949 2084640 164 1.808696 2.96626144 Borodinellopsis insignis 3229915 Plants Plants 141 2.84e-29   NTclustered gi|2783942509|gb|PQ144585.1| 3229915 g2069301 i0 90.654 75.0792682926829 107 9 65 1 38 144 110449 110554 Borodinellopsis sp. QY-2024b strain FACHB 3550 chloroplast, complete genome blastn 12313 141 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlorococcaceae Borodinellopsis Borodinellopsis insignis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;