RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJNA704949" and tax_phylum = "Candidatus Nealsoniibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Nealsoniibacteriota · 1 ✖

tax_clade 1

bioproject 1

  • PRJNA704949 · 1 ✖

analysis 1

  • blastn · 1 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5802978 5802978 PRJNA704949_P_NODE_622545_length_343_cov_2.755102_g607220_i0 PRJNA704949 622545 343 2.755102 9.44999986 Candidatus Nealsonbacteria bacterium 2093793 Bacteria Bacteria 82.4 4.14e-11   NTclustered gi|2901420295|gb|CP179887.1| 2093793 g607220 i0 83.516 0.379008746355685 91 12 26 3 212 300 534308 534397 MAG: Candidatus Nealsonbacteria bacterium isolate CK12Hparc1 chromosome, complete genome blastn 130 82.4 1 Bacteria Bacteria candidate phyla   Candidatus Nealsoniibacteriota         Candidatus Nealsonbacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;