RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA704949" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA704949 · 5 ✖

analysis 1

  • blastn · 5 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3242452 3242452 PRJNA704949_P_NODE_1670843_length_187_cov_1.507246_g1655504_i0 PRJNA704949 1670843 187 1.507246 2.81855002 uncultured Candidatus Binatia bacterium 3036252 Bacteria Bacteria 122 1.2e-23   NTclustered gi|2891481979|emb|OZ219754.1| 3036252 g1655504 i0 82.394 38.3689839572192 142 23 75 2 1 141 2155686 2155546 MAG: uncultured Candidatus Binatia bacterium isolate 58a26a4a-5c73-4e1d-804e-87f8126ae6b7 genome assembly, chromosome: 1 blastn 7175 122 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       uncultured Candidatus Binatia bacterium
3242866 3242866 PRJNA704949_P_NODE_1715683_length_184_cov_1.155556_g1700344_i0 PRJNA704949 1715683 184 1.155556 2.12622304 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 62.1 2.61e-5   NTclustered gi|2518556404|emb|OX638375.1| 2838779 g1700344 i0 87.273 3.83152173913043 55 5 30 2 27 81 2148791 2148739 MAG: Candidatus Binatia bacterium isolate 97b5e0c7-6798-4f16-949c-9b63468df6e4 genome assembly, chromosome: 1 blastn 705 62.1 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
10897427 10897427 PRJNA704949_P_NODE_1919569_length_169_cov_1.733333_g1904230_i0 PRJNA704949 1919569 169 1.733333 2.92933277 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 132 1.7600000000000002e-26   NTclustered gi|2575803556|emb|OY729432.1| 2838779 g1904230 i0 86.066 78.8461538461538 122 17 72 0 21 142 596281 596402 MAG: Candidatus Binatia bacterium isolate b65fbbe8-1638-4b94-9072-1473f084fbf4 genome assembly, chromosome: 1 blastn 13325 132 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
13446363 13446363 PRJNA704949_P_NODE_1828471_length_175_cov_2.293651_g1813132_i0 PRJNA704949 1828471 175 2.293651 4.01388925 uncultured Candidatus Binatia bacterium 3036252 Bacteria Bacteria 108 3.1e-19   NTclustered gi|2546137839|emb|OY282432.1| 3036252 g1813132 i0 87.368 27.5942857142857 95 10 54 2 28 121 1493394 1493301 MAG: uncultured Candidatus Binatia bacterium isolate 81991fb1-66cf-4eb3-b653-309a223604dd genome assembly, chromosome: 1 blastn 4829 108 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       uncultured Candidatus Binatia bacterium
17280175 17280175 PRJNA704949_P_NODE_947334_length_269_cov_1.568182_g931999_i0 PRJNA704949 947334 269 1.568182 4.21840958 uncultured Candidatus Binatia bacterium 3036252 Bacteria Bacteria 174 5.04e-39   NTclustered gi|2891481979|emb|OZ219754.1| 3036252 g931999 i0 78.906 15.9776951672862 256 54 95 0 1 256 1473240 1473495 MAG: uncultured Candidatus Binatia bacterium isolate 58a26a4a-5c73-4e1d-804e-87f8126ae6b7 genome assembly, chromosome: 1 blastn 4298 174 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       uncultured Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;