RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA704949" and tax_phylum = "Candidatus Altimarinota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Altimarinota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA704949 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3244842 3244842 PRJNA704949_P_NODE_1965183_length_168_cov_0.873950_g1949844_i0 PRJNA704949 1965183 168 0.87395 1.468236 Candidatus Gracilibacteria bacterium HOT-871 1540872 Bacteria Bacteria 278 2.14e-70   NTclustered gi|1275383184|gb|CP017714.1| 1540872 g1949844 i0 96.429 1 168 6 100 0 1 168 585814 585647 Candidatus Gracilibacteria bacterium HOT-871, complete genome blastn 168 278 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium HOT-871
18542515 18542515 PRJNA704949_P_NODE_1596155_length_193_cov_1.201389_g1580816_i0 PRJNA704949 1596155 193 1.201389 2.31868077 Candidatus Gracilibacteria bacterium HOT-871 1540872 Bacteria Bacteria 346 6.82e-91   NTclustered gi|1275383184|gb|CP017714.1| 1540872 g1580816 i0 98.964 1 193 2 100 0 1 193 710241 710433 Candidatus Gracilibacteria bacterium HOT-871, complete genome blastn 193 346 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium HOT-871
21102515 21102515 PRJNA704949_P_NODE_709697_length_319_cov_2.388889_g694368_i0 PRJNA704949 709697 319 2.388889 7.62055591 Candidatus Gracilibacteria bacterium 28_42_T64 1862133 Bacteria Bacteria 95.3 4.9e-15   NTclustered gi|1769783243|gb|CP042461.1| 1862133 g694368 i0 74.583 5.42319749216301 240 50 73 9 86 318 511500 511265 Candidatus Gracilibacteria bacterium 28_42_T64 chromosome, complete genome blastn 1730 95.3 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Gracilibacteria bacterium 28_42_T64

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;