RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA704949" and tax_phylum = "Abditibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Abditibacteriota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA704949 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5792876 5792876 PRJNA704949_P_NODE_1418465_length_208_cov_1.962264_g1403127_i0 PRJNA704949 1418465 208 1.962264 4.08150912 Abditibacteriota bacterium 2783868 Bacteria Bacteria 185 1.72e-42   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g1403127 i0 86.047 1.73076923076923 172 24 83 0 37 208 2433043 2432872 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 360 185 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
14725676 14725676 PRJNA704949_P_NODE_334912_length_467_cov_1.882775_g319976_i0 PRJNA704949 334912 467 1.882775 8.79255925 Abditibacteriota bacterium 2783868 Bacteria Bacteria 532 1.33e-146   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g319976 i0 88.377 156.21199143469 456 35 96 15 2 447 2852587 2852140 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 72951 532 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
18552907 18552907 PRJNA704949_P_NODE_833555_length_291_cov_1.169421_g818221_i0 PRJNA704949 833555 291 1.169421 3.40301511 Abditibacteriota bacterium 2783868 Bacteria Bacteria 52.8 0.027   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g818221 i0 100 0.0962199312714777 28 0 10 0 233 260 4632966 4632993 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 28 52.8 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;