RNAquarium Metadata Server
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contig_metadata

12 rows where analysis = "blastn", bioproject = "PRJNA704949" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 12 ✖

bioproject 1

  • PRJNA704949 · 12 ✖

analysis 1

  • blastn · 12 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1973147 1973147 PRJNA704949_P_NODE_37362_length_1268_cov_7.850697_g27610_i0 PRJNA704949 37362 1268 7.850697 99.54683796 Malassezia restricta virus MrV40L 2727863 Viruses Viruses 2242 0   NTclustered gi|1832308141|gb|MN603497.1| 2727863 g27610 i0 98.58 1 1268 18 100 0 1 1268 2739 1472 Malassezia restricta virus MrV40L, complete genome blastn 1268 2242 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Malassezia restricta virus MrV40L
2462677 2462677 PRJNA704949_P_NODE_1748642_length_181_cov_1.575758_g1733303_i0 PRJNA704949 1748642 181 1.575758 2.85212198 Vesiculovirus 11271 Viruses Viruses 320 3.82e-83   NTclustered gi|61832|emb|V01213.1| 11276 g1733303 i0 99.432 97.2044198895028 176 1 97 0 6 181 256 431 Vesicular stomatitis virus gene fragment encoding the G protein blastn 17594 320 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Vesiculovirus Vesicular stomatitis virus
5019248 5019248 PRJNA704949_P_NODE_95364_length_800_cov_4.909454_g83061_i0 PRJNA704949 95364 800 4.909454 39.275632 root 1 Root_unresolved Root_unresolved 1445 0   NTclustered gi|2649349941|gb|OR995580.1| 11276 g83061 i0 100 98.79625 782 0 98 0 19 800 3498 4279 Mutant Vesicular stomatitis virus clone recombinant VSVdM51-RBD, complete genome blastn 79037 1445 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae Vesiculovirus Vesicular stomatitis virus
8343837 8343837 PRJNA704949_P_NODE_1581947_length_194_cov_1.331034_g1566608_i0 PRJNA704949 1581947 194 1.331034 2.58220596 Malassezia restricta virus MrV40L 2727863 Viruses Viruses 353 4.1e-93   NTclustered gi|1832308141|gb|MN603497.1| 2727863 g1566608 i0 99.485 1.70103092783505 194 1 100 0 1 194 3492 3299 Malassezia restricta virus MrV40L, complete genome blastn 330 353 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Malassezia restricta virus MrV40L
8838828 8838828 PRJNA704949_P_NODE_1241107_length_227_cov_1.752809_g1225770_i0 PRJNA704949 1241107 227 1.752809 3.97887643 Viruses 10239 Viruses Viruses 69.4 2.01e-7   NTclustered gi|2557652486|emb|OY682391.1| 2697049 g1225770 i0 95.455 16.8370044052863 44 0 19 2 1 44 11279 11238 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 3822 69.4 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
12180013 12180013 PRJNA704949_P_NODE_772610_length_304_cov_1.819608_g757279_i0 PRJNA704949 772610 304 1.819608 5.53160832 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 52.8 0.028   NTclustered gi|2196304047|gb|MZ679036.1| 3003959 g757279 i0 94.286 0.115131578947368 35 1 12 1 143 177 4155 4188 MAG: Picornavirales sp. isolate s56-k141_864870 putative polyprotein gene, complete cds blastn 35 52.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
14725031 14725031 PRJNA704949_P_NODE_273672_length_511_cov_3.461039_g259002_i0 PRJNA704949 273672 511 3.461039 17.68590929 Ilarvirus PNRSV 3429931 Viruses Viruses 939 0   NTclustered gi|1530829376|gb|MH427285.1| 37733 g259002 i0 99.804 99.9804305283757 511 1 100 0 1 511 337 847 Prunus necrotic ringspot virus isolate PNRSV-RNA3-SA movement protein and coat protein genes, complete cds blastn 51090 939 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Bromoviridae Ilarvirus Ilarvirus PNRSV
19816065 19816065 PRJNA704949_P_NODE_1396996_length_210_cov_2.260870_g1381658_i0 PRJNA704949 1396996 210 2.26087 4.747827 Tobamovirus rapae 3432887 Viruses Viruses 383 5.75e-102   NTclustered gi|691192970|gb|KM067150.1| 29272 g1381658 i0 99.524 17.947619047619 210 1 100 0 1 210 440 231 Turnip vein-clearing virus isolate Minnesota movement protein (MP) and coat protein (CP) genes, partial cds blastn 3769 383 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae Tobamovirus Tobamovirus rapae
19824876 19824876 PRJNA704949_P_NODE_460116_length_401_cov_3.642045_g444905_i0 PRJNA704949 460116 401 3.642045 14.60460045 Totiviridae sp. 1955172 Viruses Viruses 243 2.12e-59   NTclustered gi|2396038768|gb|ON812661.1| 1955172 g444905 i0 80.984 2.40648379052369 305 58 76 0 96 400 4520 4216 MAG: Totiviridae sp. isolate TIGMIC_4, complete genome blastn 965 243 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Totiviridae sp.
21091613 21091613 PRJNA704949_P_NODE_1390917_length_211_cov_1.401235_g1375579_i0 PRJNA704949 1390917 211 1.401235 2.95660585 Chemarfal virus 260 3063286 Viruses Viruses 331 2.13e-86   NTclustered gi|2626079958|gb|OR270550.1| 3063286 g1375579 i0 96.078 3.75355450236967 204 6 97 2 7 210 146 347 MAG: Chemarfal virus 260 isolate ML188 genomic sequence blastn 792 331 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales     Chemarfal virus 260
22374035 22374035 PRJNA704949_P_NODE_322738_length_475_cov_1.708920_g307845_i0 PRJNA704949 322738 475 1.70892 8.11737 Malassezia restricta virus MrV40L 2727863 Viruses Viruses 850 0   NTclustered gi|1832308141|gb|MN603497.1| 2727863 g307845 i0 98.947 1.49263157894737 475 5 100 0 1 475 3191 2717 Malassezia restricta virus MrV40L, complete genome blastn 709 850 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Malassezia restricta virus MrV40L
23649709 23649709 PRJNA704949_P_NODE_31699_length_1403_cov_2.081979_g22473_i0 PRJNA704949 31699 1403 2.081979 29.21016537 Malassezia restricta virus MrV40L 2727863 Viruses Viruses 2023 0   NTclustered gi|1832308141|gb|MN603497.1| 2727863 g22473 i0 98.517 1.23093371347113 1146 17 99 0 258 1403 333 1478 Malassezia restricta virus MrV40L, complete genome blastn 1727 2023 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Malassezia restricta virus MrV40L

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;