RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA704949" and tax_clade = "Nitrospinota/Tectimicrobiota group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 3 ✖

bioproject 1

  • PRJNA704949 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16491489 16491489 PRJNA704949_P_NODE_221193_length_561_cov_2.384766_g206868_i0 PRJNA704949 221193 561 2.384766 13.37853726 Pseudomonadati 3379134 Bacteria Bacteria 126 3.2099999999999994e-24   NTclustered gi|1938439011|gb|CP048685.1| 2705533 g206868 i0 97.297 22.6185383244207 74 2 13 0 155 228 79747 79674 MAG: Candidatus Nitronauta litoralis isolate EB chromosome, complete genome blastn 12689 126 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota Nitrospinia Nitrospinales Nitrospinaceae Candidatus Nitronauta Candidatus Nitronauta litoralis
18543096 18543096 PRJNA704949_P_NODE_1666375_length_187_cov_2.260870_g1651036_i0 PRJNA704949 1666375 187 2.26087 4.2278269 uncultured Candidatus Entotheonella sp. 312019 Bacteria Bacteria 128 2.59e-25   NTclustered gi|2531976037|emb|OY282375.1| 312019 g1651036 i0 80.357 3.32620320855615 168 33 90 0 1 168 3552845 3553012 MAG: uncultured Candidatus Entotheonella sp. genome assembly, chromosome: 1 blastn 622 128 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota Candidatus Entotheonellia Candidatus Entotheonellales Candidatus Entotheonellaceae Candidatus Entotheonella uncultured Candidatus Entotheonella sp.
19819922 19819922 PRJNA704949_P_NODE_1884656_length_172_cov_0.878049_g1869317_i0 PRJNA704949 1884656 172 0.878049 1.51024428 uncultured Candidatus Entotheonella sp. 312019 Bacteria Bacteria 65.8 1.85e-6   NTclustered gi|2518596677|emb|OX639990.1| 312019 g1869317 i0 79.798 0.825581395348837 99 12 53 6 44 135 3032713 3032810 MAG: uncultured Candidatus Entotheonella sp. isolate 26b0520c-cf9d-432e-a440-87a3e388b1d5 genome assembly, chromosome: 1 blastn 142 65.8 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota Candidatus Entotheonellia Candidatus Entotheonellales Candidatus Entotheonellaceae Candidatus Entotheonella uncultured Candidatus Entotheonella sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;