RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA704949" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 2 ✖

bioproject 1

  • PRJNA704949 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1190813 1190813 PRJNA704949_P_NODE_880521_length_281_cov_2.064655_g865187_i0 PRJNA704949 880521 281 2.064655 5.80168055 root 1 Root_unresolved Root_unresolved 58.4 5.57e-4   NTclustered gi|923129542|ref|XM_013902783.1| 461836 g865187 i0 100 2.82562277580071 31 0 11 0 189 219 6137 6167 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_11858), partial mRNA blastn 794 58.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
14725372 14725372 PRJNA704949_P_NODE_304212_length_488_cov_1.653759_g289391_i0 PRJNA704949 304212 488 1.653759 8.07034392 Thecamonas trahens 529818 Root_unresolved Root_unresolved 52.8 0.048   NTclustered gi|923138854|ref|XM_013907438.1| 461836 g289391 i0 100 0.0573770491803279 28 0 6 0 7 34 2089 2116 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_00018), partial mRNA blastn 28 52.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;