RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA704949" and tax_clade = "Acidobacteriota subdivision 22"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Acidobacteriota subdivision 22 · 3 ✖

bioproject 1

  • PRJNA704949 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
701462 701462 PRJNA704949_P_NODE_871581_length_283_cov_1.598291_g856247_i0 PRJNA704949 871581 283 1.598291 4.52316353 Acidobacteria bacterium Mor1 1660251 Bacteria Bacteria 143 1.51e-29   NTclustered gi|1037405666|gb|CP011806.1| 1660251 g856247 i0 87.805 5.92226148409894 123 13 43 2 5 126 4043384 4043505 Acidobacteria bacterium Mor1 chromosome blastn 1676 143 1 Bacteria Acidobacteriota subdivision 22 Pseudomonadati Acidobacteriota         Acidobacteria bacterium Mor1
4515180 4515180 PRJNA704949_P_NODE_1134024_length_241_cov_0.895833_g1118688_i0 PRJNA704949 1134024 241 0.895833 2.15895753 Acidobacteria bacterium Mor1 1660251 Bacteria Bacteria 158 4.47e-34   NTclustered gi|1037405666|gb|CP011806.1| 1660251 g1118688 i0 80 0.912863070539419 220 38 90 6 12 228 1208125 1208341 Acidobacteria bacterium Mor1 chromosome blastn 220 158 1 Bacteria Acidobacteriota subdivision 22 Pseudomonadati Acidobacteriota         Acidobacteria bacterium Mor1
21590586 21590586 PRJNA704949_P_NODE_2132137_length_163_cov_0.912281_g2116798_i0 PRJNA704949 2132137 163 0.912281 1.48701803 root 1 Root_unresolved Root_unresolved 65.8 1.75e-6   NTclustered gi|1037405666|gb|CP011806.1| 1660251 g2116798 i0 97.368 1.76073619631902 38 1 23 0 120 157 2688386 2688423 Acidobacteria bacterium Mor1 chromosome blastn 287 65.8 1 Bacteria Acidobacteriota subdivision 22 Pseudomonadati Acidobacteriota         Acidobacteria bacterium Mor1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;