RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA703759" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA703759 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
684489 684489 PRJNA703759_P_NODE_36101_length_252_cov_0.871508_g35625_i0 PRJNA703759 36101 252 0.871508 2.19620016 Haliotis rubra 36100 Mollusca Mollusca 52.8 0.023   NTclustered gi|2194142037|ref|XM_046727040.1| 36100 g35625 i0 100 0.111111111111111 28 0 11 0 108 135 77 50 PREDICTED: Haliotis rubra platelet glycoprotein Ib alpha chain-like (LOC124290331), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis rubra
8337592 8337592 PRJNA703759_P_NODE_31447_length_262_cov_1.238095_g30971_i0 PRJNA703759 31447 262 1.238095 3.2438089 Lottia gigantea 225164 Mollusca Mollusca 52.8 0.024   NTclustered gi|676428329|ref|XM_009046992.1| 225164 g30971 i0 100 0.106870229007634 28 0 11 0 110 137 1197 1224 Lottia gigantea hypothetical protein partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lottiidae Lottia Lottia gigantea
10888276 10888276 PRJNA703759_P_NODE_23289_length_292_cov_1.068493_g22813_i0 PRJNA703759 23289 292 1.068493 3.11999956 Patella vulgata 6465 Mollusca Mollusca 52.8 0.027   NTclustered gi|2506320410|ref|XM_050541299.2| 6465 g22813 i0 96.875 0.10958904109589 32 0 11 1 252 283 2130 2100 PREDICTED: Patella vulgata arsenite methyltransferase (LOC126815585), mRNA blastn 32 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Patellidae Patella Patella vulgata
19811485 19811485 PRJNA703759_P_NODE_39136_length_250_cov_0.881356_g38660_i0 PRJNA703759 39136 250 0.881356 2.20339 Argopecten irradians 31199 Mollusca Mollusca 52.8 0.023   NTclustered gi|2835385623|ref|XM_069267537.1| 31199 g38660 i0 100 0.112 28 0 11 0 67 94 3221 3248 PREDICTED: Argopecten irradians polycomb protein SUZ12-like (LOC138323141), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pectinida Pectinidae Argopecten Argopecten irradians

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;