RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA703759" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA703759 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1184812 1184812 PRJNA703759_P_NODE_15661_length_343_cov_1.059259_g15185_i0 PRJNA703759 15661 343 1.059259 3.63325837 Metazoa 33208 Cnidaria other_Eukaryota 54.7 0.009   NTclustered gi|2917940744|emb|OZ237568.1| 6108 g15185 i0 100 0.180758017492711 29 0 8 0 185 213 10304831 10304803 Anemonia sulcata genome assembly, chromosome: 14 blastn 62 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
3235106 3235106 PRJNA703759_P_NODE_18943_length_316_cov_1.925926_g18467_i0 PRJNA703759 18943 316 1.925926 6.08592616 Hydra vulgaris 6087 Cnidaria other_Eukaryota 407 5.479999999999999e-109   NTclustered gi|2744900011|ref|XM_065815552.1| 6087 g18467 i0 95.652 18.7689873417722 253 11 80 0 1 253 1111 859 PREDICTED: Hydra vulgaris uncharacterized LOC136089510 (LOC136089510), mRNA blastn 5931 407 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
10113416 10113416 PRJNA703759_P_NODE_18428_length_320_cov_1.554656_g17952_i0 PRJNA703759 18428 320 1.554656 4.9748992 Montipora 46703 Cnidaria other_Eukaryota 54.7 0.008   NTclustered gi|2812148162|ref|XM_068886605.1| 246305 g17952 i0 96.97 0.20625 33 0 10 1 76 108 1637 1668 PREDICTED: Montipora capricornis uncharacterized protein (LOC138040895), mRNA blastn 66 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Montipora Montipora capricornis
10888292 10888292 PRJNA703759_P_NODE_23909_length_289_cov_1.444444_g23433_i0 PRJNA703759 23909 289 1.444444 4.17444316 Hydra vulgaris 6087 Cnidaria other_Eukaryota 52.8 0.027   NTclustered gi|2744839881|ref|XM_065787765.1| 6087 g23433 i0 100 0.0968858131487889 28 0 10 0 257 284 1247 1220 PREDICTED: Hydra vulgaris uncharacterized LOC124810360 (LOC124810360), transcript variant X2, mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydridae Hydra Hydra vulgaris
22361781 22361781 PRJNA703759_P_NODE_38018_length_251_cov_0.876404_g37542_i0 PRJNA703759 38018 251 0.876404 2.19977404 Hydractinia symbiolongicarpus 13093 Cnidaria other_Eukaryota 97.1 1.04e-15   NTclustered gi|2518981352|ref|XM_057441058.1| 13093 g37542 i0 92.647 0.908366533864542 68 3 27 2 1 67 1612 1546 PREDICTED: Hydractinia symbiolongicarpus thialysine N-epsilon-acetyltransferase-like (LOC130625932), mRNA blastn 228 97.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Anthoathecata Hydractiniidae Hydractinia Hydractinia symbiolongicarpus
23637839 23637839 PRJNA703759_P_NODE_7199_length_522_cov_1.216036_g6723_i0 PRJNA703759 7199 522 1.216036 6.34770792 Anemonia sulcata 6108 Cnidaria other_Eukaryota 54.7 0.014   NTclustered gi|2917940759|emb|OZ237572.1| 6108 g6723 i0 100 0.222222222222222 29 0 6 0 327 355 8771542 8771514 Anemonia sulcata genome assembly, chromosome: 18 blastn 116 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;