RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA703759" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA703759 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1184884 1184884 PRJNA703759_P_NODE_23261_length_292_cov_1.232877_g22785_i0 PRJNA703759 23261 292 1.232877 3.60000084 Candidatus Nanosynbacter 2093823 Bacteria Bacteria 512 1.03e-140   NTclustered gi|734569044|gb|CP007496.1| 2093824 g22785 i0 98.288 3.1472602739726 292 5 100 0 1 292 538121 538412 Candidatus Nanosynbacter lyticus strain TM7x chromosome, complete genome blastn 919 512 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Nanosynbacterales Candidatus Nanosynbacteraceae Candidatus Nanosynbacter Candidatus Nanosynbacter lyticus
21086961 21086961 PRJNA703759_P_NODE_37617_length_251_cov_0.876404_g37141_i0 PRJNA703759 37617 251 0.876404 2.19977404 uncultured Candidatus Saccharibacteria bacterium 179883 Bacteria Bacteria 145 3.65e-30   NTclustered gi|2874253997|emb|OY970322.1| 179883 g37141 i0 98.765 24.1195219123506 81 1 32 0 83 163 1087175 1087095 MAG: uncultured Candidatus Saccharibacteria bacterium isolate MFD05512.bin.c.2 genome assembly, chromosome: 1 blastn 6054 145 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         uncultured Candidatus Saccharibacteria bacterium
23637625 23637625 PRJNA703759_P_NODE_46539_length_245_cov_0.906977_g46063_i0 PRJNA703759 46539 245 0.906977 2.22209365 TM7 phylum sp. oral taxon 349 713051 Bacteria Bacteria 425 1.1299999999999999e-114   NTclustered gi|2028829559|gb|CP072328.1| 713051 g46063 i0 97.959 2.00408163265306 245 5 100 0 1 245 19103 18859 TM7 phylum sp. oral taxon 349 strain PM007 chromosome, complete genome blastn 491 425 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         TM7 phylum sp. oral taxon 349

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;