RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA703759" and tax_clade = "ant, tsetse, mealybug, aphid, etc. endosymbionts"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • ant, tsetse, mealybug, aphid, etc. endosymbionts · 2 ✖

bioproject 1

  • PRJNA703759 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1960267 1960267 PRJNA703759_P_NODE_25962_length_281_cov_1.442308_g25486_i0 PRJNA703759 25962 281 1.442308 4.05288548 Candidatus Stammera capleta 2608262 Bacteria Bacteria 54.7 0.007   NTclustered gi|2676815338|gb|CP144808.1| 2608262 g25486 i0 96.875 0.313167259786477 32 1 11 0 235 266 120396 120365 MAG: Candidatus Stammera capleta isolate JNFEHELC chromosome blastn 88 54.7 1 Bacteria ant, tsetse, mealybug, aphid, etc. endosymbionts Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Candidatus Stammera Candidatus Stammera capleta
21087216 21087216 PRJNA703759_P_NODE_48337_length_244_cov_0.912281_g47861_i0 PRJNA703759 48337 244 0.912281 2.22596564 Candidatus Stammera capleta 2608262 Bacteria Bacteria 54.7 0.006   NTclustered gi|2676815367|gb|CP144828.1| 2608262 g47861 i0 96.97 0.25 33 0 13 1 65 96 133825 133793 MAG: Candidatus Stammera capleta isolate GJDJECCL chromosome blastn 61 54.7 1 Bacteria ant, tsetse, mealybug, aphid, etc. endosymbionts Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Candidatus Stammera Candidatus Stammera capleta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;