RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA702290" and tax_phylum = "Duplornaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Duplornaviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA702290 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
683742 683742 PRJNA702290_P_NODE_1281_length_190_cov_10.933775_g1273_i0 PRJNA702290 1281 190 10.933775 20.7741725 Seadornavirus kadipiroense 3241299 Viruses Viruses 135 1.5800000000000002e-27   NTclustered gi|2083529913|tpd|BR001721.1| 104580 g1273 i0 98.684 0.778947368421053 76 1 78 0 3 78 338 413 TPA_asm: Kadipiro virus rat/2019/410 RdRp gene for RNA-dependent RNA polymerase, partial cds blastn 148 135 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Seadornavirus Seadornavirus kadipiroense
1959779 1959779 PRJNA702290_P_NODE_1062_length_191_cov_6.842105_g1054_i0 PRJNA702290 1062 191 6.842105 13.06842055 Seadornavirus kadipiroense 3241299 Viruses Viruses 139 1.23e-28   NTclustered gi|2083529927|tpd|BR001728.1| 104580 g1054 i0 100 0.769633507853403 75 0 77 0 116 190 1296 1370 TPA_asm: Kadipiro virus rat/2019/399 gene for putative VP8 protein, complete cds blastn 147 139 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Seadornavirus Seadornavirus kadipiroense
22360944 22360944 PRJNA702290_P_NODE_1358_length_179_cov_45.150000_g1350_i0 PRJNA702290 1358 179 45.15 80.8185 Seadornavirus kadipiroense 3241299 Viruses Viruses 315 1.75e-81   NTclustered gi|2083529913|tpd|BR001721.1| 104580 g1350 i0 99.422 0.966480446927374 173 1 97 0 3 175 2405 2233 TPA_asm: Kadipiro virus rat/2019/410 RdRp gene for RNA-dependent RNA polymerase, partial cds blastn 173 315 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Seadornavirus Seadornavirus kadipiroense
22360980 22360980 PRJNA702290_P_NODE_918_length_191_cov_10.190789_g910_i0 PRJNA702290 918 191 10.190789 19.46440699 Seadornavirus kadipiroense 3241299 Viruses Viruses 143 9.479999999999999e-30   NTclustered gi|2083529913|tpd|BR001721.1| 104580 g910 i0 98.75 1.8848167539267 80 1 80 0 112 191 827 748 TPA_asm: Kadipiro virus rat/2019/410 RdRp gene for RNA-dependent RNA polymerase, partial cds blastn 360 143 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Seadornavirus Seadornavirus kadipiroense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;